Knowledge (XXG)

Strain (biology)

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404:; Leroy, Eric M.; Lever, Mark S.; MΓΌhlberger, Elke; Netesov, Sergey V.; Olinger, Gene G.; Palacios, Gustavo; Patterson, Jean L.; Paweska, Janusz T.; Pitt, Louise; Radoshitzky, Sheli R.; Saphire, Erica Ollmann; Smither, Sophie J.; Swanepoel, Robert; Towner, Jonathan S.; van der Groen, Guido; Volchkov, Viktor E.; Wahl-Jensen, Victoria; Warren, Travis K.; Weidmann, Manfred; Nichol, Stuart T. (2012). 305: 224: 289:, and is very well understood. It has remained a popular model organism for many other reasons, like the ease of its breeding and maintenance, and the speed and volume of its reproduction. Various specific strains have been developed, including a flightless version with stunted wings (also used in the pet trade as 180:
The term has no official ranking status in botany; the term refers to the collective descendants produced from a common ancestor that share a uniform morphological or physiological character. A strain is a designated group of offspring that are either descended from a modified plant (produced by
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is most common species for prokaryotic strain engineering. Scientists have succeeded in establishing viable minimal genomes from which new strains can be developed. These minimal strains provide a near guarantee that experiments on genes outside the minimal framework will not be effected by
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or "flu" virus. These flu strains are characterized by their differing isoforms of surface proteins. New viral strains can be created due to mutation or swapping of genetic components when two or more viruses infect the same cell in nature. These phenomena are known respectively as
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Kuhn, Jens H.; Bao, Yiming; Bavari, Sina; Becker, Stephan; Bradfute, Steven; Brister, J. Rodney; Bukreyev, Alexander A.; Chandran, Kartik; Davey, Robert A.; Dolnik, Olga; Dye, John M.; Enterlein, Sven; Hensley, Lisa E.; Honko, Anna N.; Jahrling, Peter B.; Johnson, Karl M.;
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that is passed on to later generations; the strain designation, which is normally a number or a formal name, covers all the plants that descend from the originally modified plant. The rice plants in the strain can be bred to other rice strains or
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In biotechnology, microbial strains have been constructed to establish metabolic pathways suitable for treating a variety of applications. Historically, a major effort of metabolic research has been devoted to the field of biofuel production.
259:. A given inbred rodent population is considered genetically identical after 20 generations of sibling-mating. Many rodent strains have been developed for a variety of disease models, and they are also often used to test drug toxicity. 156:
are also often used as a chassis for the expression of simple proteins. These strains, such as BL21, are genetically modified to minimize protease activity, hence enabling potential for high efficiency industrial scale
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Yang, Guang; Zhao, Lifen; Liu, Bing; Shan, Yujia; Li, Yang; Zhou, Huimin; Jia, Li (2018). "Nutritional support contributes to recuperation in a rat model of aplastic anemia by enhancing mitochondrial function".
205:, and if desirable plants are produced, these are further bred to stabilize the desirable traits; the stabilized plants that can be propagated and "come true" (remain identical to the parent plant) are given a 121:. Microbial strains can also be differentiated by their genetic makeup using metagenomic methods to maximize resolution within species. This has become a valuable tool to analyze the 930: 137:
influenza virus. While funding for such research has aroused controversy at times due to safety concerns, leading to a temporary pause, it has subsequently proceeded.
53:. Strains are often seen as inherently artificial concepts, characterized by a specific intent for genetic isolation. This is most easily observed in 849: 406:"Virus nomenclature below the species level: a standardized nomenclature for natural variants of viruses assigned to the family Filoviridae" 1073: 1024: 1068: 783:
Steensels, Jan; Snoek, Tim; Meersman, Esther; Nicolino, Martina Picca; Voordeckers, Karin; Verstrepen, Kevin J. (2014-09-01).
1053: 885: 638: 74: 89:', and 'isolate' in the virology community, and most virologists simply copy the usage of terms from others". 268: 169: 883:
Anderson, Mark S.; Bluestone, Jeffrey A. (2004-11-29). "THE NOD MOUSE: A Model of Immune Dysregulation".
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Scientists have modified strains of viruses in order to study their behavior, as in the case of the
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conventional breeding or by biotechnological means), or which result from genetic mutation.
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are the most common subjects of eukaryotic genetic modification, especially with respect to
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It has been said that "there is no universally accepted definition for the terms 'strain', '
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Butler, Declan (2012). "Scientists call for 60-day suspension of mutant flu research".
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Sung, Bong Hyun; Choe, Donghui; Kim, Sun Chang; Cho, Byung-Kwan (2016-11-30).
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uniform. Strains are used in laboratory experiments. Mouse strains can be
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Cheon, Dong-Joo; Orsulic, Sandra (2011-01-24). "Mouse Models of Cancer".
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This article is about strains in biology. For strain in chemistry, see
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Liu, Tiangang; Khosla, Chaitan (2010-11-03). "Genetic modification of
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Yong, Ed (2013). "Scientists create hybrid flu that can go airborne".
683:"Construction of a minimal genome as a chassis for synthetic biology" 286: 256: 244: 105: 70: 46: 108:). For example, a "flu strain" is a certain biological form of the 165: 97: 196:
of the genetically modified rice plant are a strain with unique
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and are typically quarantined by the physical constraints of a
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Genetic variant, subtype or culture within a biological species
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The Wistar rat, which was the first developed rat model strain
866:"Geneticist shaped hybrid rice strains - Los Angeles Times" 844:, Ware, Hertfordshire: Wordsworth Reference, p. 361, 209:
name and released into production to be used by farmers.
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Drosophila melanogaster Β§ Model organism in genetics
496:"Microbiology: the road to strain-level identification" 358:DIJKSHOORN, L.; URSING, B.M.; URSING, J.B. (2000). 931:Annual Review of Pathology: Mechanisms of Disease 96:variant or subtype of a microorganism (e.g., a 65:. Strains are also commonly referred to within 148:non-essential pathways. Optimized strains of 57:where strains are derived from a single cell 8: 730:Jeong, H; Kim, HJ; Lee, SJ (19 March 2015). 1034:International Mouse Strain Resource (IMSR) 816: 759: 698: 608: 511: 439: 421: 375: 281:) was among the first organisms used for 152:are typically used for this application. 899:10.1146/annurev.immunol.23.021704.115643 864:Maugh II, Thomas H. (18 February 2008). 222: 350: 944:10.1146/annurev.pathol.3.121806.154244 239:strain is a group of animals that is 7: 293:for small reptiles and amphibians). 192:material into a rice plant, all the 75:rodents used in experimental studies 842:The Wordsworth Dictionary of Botany 652:10.1146/annurev-genet-102209-163440 45:is a genetic variant, a subtype or 188:strains are made by inserting new 25: 303: 255:, while rat strains are usually 364:Journal of Medical Microbiology 1: 732:"Complete Genome Sequence of 591:Lee, Sang Yup (2012-11-16). 1074:Infraspecific bacteria taxa 886:Annual Review of Immunology 494:Marx, Vivien (2016-04-28). 1090: 377:10.1099/0022-1317-49-5-397 266: 216: 29: 1013:Coli Genetic Stock Center 988:10.1016/j.nut.2017.09.002 789:FEMS Microbiology Reviews 639:Annual Review of Genetics 636:for Biofuel Production". 473:10.1038/nature.2013.12925 423:10.1007/s00705-012-1454-0 81:Microbiology and virology 1069:Infraspecific virus taxa 752:10.1128/genomeA.00134-15 545:10.1038/nature.2012.9873 801:10.1111/1574-6976.12073 279:Drosophila melanogaster 170:industrial fermentation 840:Usher, George (1996), 687:Essays in Biochemistry 228: 597:ACS Synthetic Biology 226: 217:Further information: 129:Artificial constructs 740:Genome Announcements 410:Archives of Virology 324:Clone (cell biology) 253:genetically modified 184:As an example, some 49:within a biological 700:10.1042/ebc20160024 571:Nature News Special 198:genetic information 1054:Microbiology terms 1027:2019-05-19 at the 513:10.1038/nmeth.3837 229: 159:protein production 32:Strain (chemistry) 870:Los Angeles Times 851:978-1-85326-374-3 610:10.1021/sb300109d 334:Variant (biology) 16:(Redirected from 1081: 1039:Rat strain index 1000: 999: 970: 964: 963: 925: 919: 918: 880: 874: 873: 861: 855: 854: 837: 831: 830: 820: 780: 774: 773: 763: 734:Escherichia coli 727: 721: 720: 702: 678: 672: 671: 634:Escherichia coli 629: 623: 622: 612: 588: 582: 581: 579: 577: 563: 557: 556: 532: 526: 525: 515: 491: 485: 484: 460: 454: 453: 443: 425: 396: 390: 389: 379: 355: 313: 308: 307: 283:genetic analysis 275:common fruit fly 233:laboratory mouse 144:Escherichia coli 21: 1089: 1088: 1084: 1083: 1082: 1080: 1079: 1078: 1044: 1043: 1029:Wayback Machine 1009: 1004: 1003: 972: 971: 967: 927: 926: 922: 882: 881: 877: 863: 862: 858: 852: 839: 838: 834: 782: 781: 777: 729: 728: 724: 680: 679: 675: 631: 630: 626: 603:(11): 491–492. 590: 589: 585: 575: 573: 565: 564: 560: 534: 533: 529: 493: 492: 488: 462: 461: 457: 398: 397: 393: 357: 356: 352: 347: 319:Genetic isolate 309: 302: 299: 285:, has a simple 271: 265: 221: 215: 178: 131: 119:antigenic shift 115:antigenic drift 83: 35: 28: 23: 22: 18:Bacteria strain 15: 12: 11: 5: 1087: 1085: 1077: 1076: 1071: 1066: 1061: 1056: 1046: 1045: 1042: 1041: 1036: 1031: 1015: 1008: 1007:External links 1005: 1002: 1001: 965: 920: 893:(1): 447–485. 875: 856: 850: 832: 795:(5): 947–995. 775: 722: 693:(4): 337–346. 673: 624: 583: 558: 527: 506:(5): 401–404. 500:Nature Methods 486: 455: 416:(1): 301–311. 402:Kobinger, Gary 391: 370:(5): 397–401. 349: 348: 346: 343: 342: 341: 336: 331: 329:Race (biology) 326: 321: 315: 314: 311:Biology portal 298: 295: 267:Main article: 264: 261: 219:Model organism 214: 211: 177: 174: 130: 127: 92:A strain is a 82: 79: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 1086: 1075: 1072: 1070: 1067: 1065: 1062: 1060: 1057: 1055: 1052: 1051: 1049: 1040: 1037: 1035: 1032: 1030: 1026: 1023: 1021: 1016: 1014: 1011: 1010: 1006: 997: 993: 989: 985: 981: 977: 969: 966: 961: 957: 953: 949: 945: 941: 938:(1): 95–119. 937: 933: 932: 924: 921: 916: 912: 908: 904: 900: 896: 892: 888: 887: 879: 876: 871: 867: 860: 857: 853: 847: 843: 836: 833: 828: 824: 819: 814: 810: 806: 802: 798: 794: 790: 786: 779: 776: 771: 767: 762: 757: 753: 749: 745: 741: 737: 735: 726: 723: 718: 714: 710: 706: 701: 696: 692: 688: 684: 677: 674: 669: 665: 661: 657: 653: 649: 645: 641: 640: 635: 628: 625: 620: 616: 611: 606: 602: 598: 594: 587: 584: 572: 568: 562: 559: 554: 550: 546: 542: 538: 531: 528: 523: 519: 514: 509: 505: 501: 497: 490: 487: 482: 478: 474: 470: 466: 459: 456: 451: 447: 442: 437: 433: 429: 424: 419: 415: 411: 407: 403: 395: 392: 387: 383: 378: 373: 369: 365: 361: 354: 351: 344: 340: 337: 335: 332: 330: 327: 325: 322: 320: 317: 316: 312: 306: 301: 296: 294: 292: 288: 284: 280: 276: 270: 262: 260: 258: 254: 250: 246: 242: 238: 234: 225: 220: 212: 210: 208: 204: 199: 195: 191: 187: 182: 175: 173: 171: 167: 162: 160: 155: 151: 146: 145: 138: 136: 128: 126: 124: 120: 116: 111: 107: 103: 99: 95: 90: 88: 80: 78: 76: 72: 68: 64: 60: 56: 52: 48: 44: 40: 33: 19: 1064:Taxa by rank 1022:strain index 1019: 979: 975: 968: 935: 929: 923: 890: 884: 878: 869: 859: 841: 835: 792: 788: 778: 743: 739: 736:Strain BL21" 733: 725: 690: 686: 676: 646:(1): 53–69. 643: 637: 633: 627: 600: 596: 586: 574:. Retrieved 570: 567:"Mutant flu" 561: 536: 530: 503: 499: 489: 464: 458: 413: 409: 394: 367: 363: 353: 278: 272: 230: 183: 179: 163: 153: 149: 142: 139: 132: 91: 84: 55:microbiology 42: 36: 339:Fish stocks 241:genetically 194:descendants 164:Strains of 73:, and with 1048:Categories 1018:EcoliWiki 345:References 123:microbiome 63:Petri dish 982:: 67–77. 976:Nutrition 952:1553-4006 907:0732-0582 809:0168-6445 709:0071-1365 660:0066-4197 481:181077199 432:0304-8608 291:live food 203:cultivars 110:influenza 102:bacterium 47:a culture 1059:Virology 1025:Archived 996:29290359 960:20936938 915:15771578 827:24724938 770:25792055 717:27903821 668:20822440 619:23656224 576:21 April 553:84203734 522:27123815 450:23001720 386:10798550 297:See also 207:cultivar 67:virology 1020:E. coli 818:4293462 761:4395058 441:3535543 263:Insects 249:mutated 213:Rodents 190:genetic 154:E. coli 150:E. coli 94:genetic 87:variant 51:species 39:biology 994:  958:  950:  913:  905:  848:  825:  815:  807:  768:  758:  715:  707:  666:  658:  617:  551:  537:Nature 520:  479:  465:Nature 448:  438:  430:  384:  287:genome 257:inbred 245:inbred 176:Plants 166:yeasts 106:fungus 71:botany 59:colony 43:strain 746:(2). 549:S2CID 477:S2CID 251:, or 98:virus 992:PMID 956:PMID 948:ISSN 911:PMID 903:ISSN 846:ISBN 823:PMID 805:ISSN 766:PMID 713:PMID 705:ISSN 664:PMID 656:ISSN 615:PMID 578:2019 518:PMID 446:PMID 428:ISSN 382:PMID 273:The 186:rice 135:H5N1 117:and 41:, a 984:doi 940:doi 895:doi 813:PMC 797:doi 756:PMC 748:doi 695:doi 648:doi 605:doi 541:doi 508:doi 469:doi 436:PMC 418:doi 414:158 372:doi 237:rat 235:or 125:. 104:or 37:In 1050:: 990:. 980:46 978:. 954:. 946:. 934:. 909:. 901:. 891:23 889:. 868:. 821:. 811:. 803:. 793:38 791:. 787:. 764:. 754:. 742:. 738:. 711:. 703:. 691:60 689:. 685:. 662:. 654:. 644:44 642:. 613:. 599:. 595:. 569:. 547:. 539:. 516:. 504:13 502:. 498:. 475:. 467:. 444:. 434:. 426:. 412:. 408:. 380:. 368:49 366:. 362:. 247:, 231:A 172:. 161:. 100:, 77:. 69:, 998:. 986:: 962:. 942:: 936:6 917:. 897:: 872:. 829:. 799:: 772:. 750:: 744:3 719:. 697:: 670:. 650:: 621:. 607:: 601:1 580:. 555:. 543:: 524:. 510:: 483:. 471:: 452:. 420:: 388:. 374:: 277:( 34:. 20:)

Index

Bacteria strain
Strain (chemistry)
biology
a culture
species
microbiology
colony
Petri dish
virology
botany
rodents used in experimental studies
variant
genetic
virus
bacterium
fungus
influenza
antigenic drift
antigenic shift
microbiome
H5N1
Escherichia coli
protein production
yeasts
industrial fermentation
rice
genetic
descendants
genetic information
cultivars

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