Knowledge (XXG)

CidA/LrgA holin

Source πŸ“

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formation by releasing DNA from lysed cells which contributes to the biofilm matrix. CidA, a 131 aa protein with 4 putative TMSs, is believed to be the holin which exports the autolysin CidB, while LrgA may be an anti-holin, a protein that binds and inhibits holin activity. If this is a general
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Desvaux, MickaΓ«l; Khan, Arshad; Beatson, Scott A.; Scott-Tucker, Anthony; Henderson, Ian R. (2005). "Protein secretion systems in Fusobacterium nucleatum: genomic identification of Type 4 piliation and complete Type V pathways brings new insight into mechanisms of pathogenesis".
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operon is activated by CidR in the presence of acetic acid. Both CidAB and LrgAB affect biofilm formation, oxidative stress, stationary phase survival and antibiotic tolerance in a reciprocal fashion, and their genes are regulated by the LytSR two component regulatory system.
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Fischer, A.; Kambara, K.; Meyer, H.; Stenz, L.; Bonetti, E.-J.; Girard, M.; Lalk, M.; Francois, P.; Schrenzel, J. (2014). "GdpS contributes to Staphylococcus aureus biofilm formation by regulation of eDNA release".
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LrgA are homologous holin and anti-holin proteins, each with 4 putative transmembrane segments (TMSs). Members of the CidA/LrgA holin family also include putative murine hydrolase exporters from a wide range of
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Moormeier, Derek E.; Endres, Jennifer L.; Mann, Ethan E.; Sadykov, Marat R.; Horswill, Alexander R.; Rice, Kelly C.; Fey, Paul D.; Bayles, Kenneth W. (2013-06-01).
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are expressed mostly in the interior of tower structures in the biofilms, regulated by oxygen availability. Analogous proteins may be linked to competence in
652:"Use of microfluidic technology to analyze gene expression during Staphylococcus aureus biofilm formation reveals distinct physiological niches" 850: 840: 134: 59:. Most CidA/LrgA holin family proteins vary in size between 100 and 160 amino acyl residues (aas) in length although a few are larger. 338:"Holins in Bacteria, Eukaryotes, and Archaea: Multifunctional Xenologues with Potential Biotechnological and Biomedical Applications" 593:
Sharma-Kuinkel, Batu K.; Mann, Ethan E.; Ahn, Jong-Sam; Kuechenmeister, Lisa J.; Dunman, Paul M.; Bayles, Kenneth W. (2009-08-01).
295:"The Staphylococcus aureus cidC gene encodes a pyruvate oxidase that affects acetate metabolism and cell death in stationary phase" 536:
Yang, Soo-Jin; Rice, Kelly C.; Brown, Raquel J.; Patton, Toni G.; Liou, Linda E.; Park, Yong Ho; Bayles, Kenneth W. (2005-09-01).
835: 717:"Identification of the Streptococcus mutans LytST two-component regulon reveals its contribution to oxidative stress tolerance" 772: 845: 830: 825: 493:
Bayles, Kenneth W. (2003-07-01). "Are the molecular strategies that control apoptosis conserved in bacteria?".
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It has been proposed that CidA and CidB (23% and 32% identical to LrgA and LrgB, respectively) are involved in
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mechanism for programmed cell death, this would explain their near ubiquity in the prokaryotic world.
663: 111: 538:"A LysR-type regulator, CidR, is required for induction of the Staphylococcus aureus cidABC operon" 324: 756: 738: 697: 679: 632: 614: 575: 557: 518: 510: 475: 457: 410: 367: 316: 281: 251: 221: 178: 715:
Ahn, Sang-Joon; Qu, Ming-Da; Roberts, Elisha; Burne, Robert A.; Rice, Kelly C. (2012-01-01).
746: 728: 687: 671: 622: 606: 565: 549: 502: 465: 449: 400: 392: 357: 349: 306: 273: 243: 211: 203: 168: 160: 595:"The Staphylococcus aureus LytSR two-component regulatory system affects biofilm formation" 855: 667: 786: 751: 716: 692: 651: 627: 594: 570: 537: 470: 437: 405: 380: 362: 337: 216: 191: 506: 173: 148: 32: 28: 819: 553: 396: 311: 294: 164: 94: 328: 97:
techniques have been used to follow gene expression temporally and spatially during
247: 381:"Periplasmic Domains Define Holin-Antiholin Interactions in T4 Lysis Inhibition" 192:"Acetic Acid Acts as a Volatile Signal To Stimulate Bacterial Biofilm Formation" 781: 277: 800: 24: 742: 733: 683: 618: 561: 514: 461: 293:
Patton, Toni G.; Rice, Kelly C.; Foster, Mary K.; Bayles, Kenneth W. (2005).
438:"Staphylococcus aureus CidA and LrgA proteins exhibit holin-like properties" 72: 760: 701: 636: 579: 522: 479: 414: 371: 320: 285: 255: 225: 207: 182: 675: 610: 453: 353: 98: 76: 56: 436:
Ranjit, Dev K.; Endres, Jennifer L.; Bayles, Kenneth W. (2011-05-01).
149:"Identification of LytSR-regulated genes from Staphylococcus aureus" 129: 124: 75:
in eukaryotes. These proteins are known to regulate and influence
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Creative Commons Attribution-ShareAlike 3.0 Unported License
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Chen, Yun; Gozzi, Kevin; Yan, Fang; Chai, Yunrong (2015).
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Tran, Tram Anh T.; Struck, Douglas K.; Young, Ry (2005).
795: 801:"1.E.14 The CidA/LrgA Holin (CidA/LrgA Holin) Family" 770: 236:Biochimica et Biophysica Acta (BBA) - Biomembranes 336:Saier, Milton H.; Reddy, Bhaskara L. (2015). 266:International Journal of Medical Microbiology 8: 27:) is a group of proteins named after CidA ( 750: 732: 691: 626: 569: 469: 404: 361: 310: 215: 172: 16:Class of transmembrane transport proteins 147:Brunskill, E. W.; Bayles, K. W. (1996). 21:CidA/LrgA Holin (CidA/LrgA Holin) Family 777: 428: 812:. All relevant terms must be followed. 656:Applied and Environmental Microbiology 7: 135:Transporter Classification Database 71:in a process that is analogous to 14: 798:, this article uses content from 780: 554:10.1128/JB.187.17.5893-5900.2005 397:10.1128/JB.187.19.6631-6640.2005 312:10.1111/j.1365-2958.2005.04653.x 165:10.1128/jb.178.19.5810-5812.1996 101:formation, revealing that both 1: 507:10.1016/s0966-842x(03)00144-6 248:10.1016/j.bbamem.2005.05.002 872: 851:Integral membrane proteins 841:Transmembrane transporters 278:10.1016/j.ijmm.2013.10.010 734:10.1186/1471-2180-12-187 599:Journal of Bacteriology 542:Journal of Bacteriology 442:Journal of Bacteriology 385:Journal of Bacteriology 342:Journal of Bacteriology 153:Journal of Bacteriology 836:Transmembrane proteins 495:Trends in Microbiology 299:Molecular Microbiology 53:Gram-negative bacteria 208:10.1128/mBio.00392-15 69:programmed cell death 38:Staphylococcus aureus 808:, but not under the 676:10.1128/AEM.00395-13 668:2013ApEnM..79.3413M 611:10.1128/JB.00348-09 454:10.1128/JB.01545-10 354:10.1128/JB.02046-14 846:Transport proteins 831:Membrane proteins 662:(11): 3413–3424. 605:(15): 4767–4775. 548:(17): 5893–5900. 448:(10): 2468–2476. 391:(19): 6631–6640. 159:(19): 5810–5812. 863: 826:Protein families 785: 784: 776: 765: 764: 754: 736: 721:BMC Microbiology 712: 706: 705: 695: 647: 641: 640: 630: 590: 584: 583: 573: 533: 527: 526: 490: 484: 483: 473: 433: 418: 408: 375: 365: 332: 314: 305:(6): 1664–1674. 289: 272:(3–4): 284–299. 259: 229: 219: 186: 176: 871: 870: 866: 865: 864: 862: 861: 860: 816: 815: 791: 779: 771: 769: 768: 714: 713: 709: 649: 648: 644: 592: 591: 587: 535: 534: 530: 492: 491: 487: 435: 434: 430: 425: 378: 335: 292: 262: 232: 189: 146: 143: 141:Further reading 121: 86: 65: 17: 12: 11: 5: 869: 867: 859: 858: 853: 848: 843: 838: 833: 828: 818: 817: 790: 789: 767: 766: 707: 642: 585: 528: 501:(7): 306–311. 485: 427: 426: 424: 421: 420: 419: 376: 333: 290: 260: 230: 187: 142: 139: 138: 137: 132: 127: 120: 117: 85: 82: 64: 61: 33:TC# 1.E.14.1.1 29:TC# 1.E.14.1.2 15: 13: 10: 9: 6: 4: 3: 2: 868: 857: 854: 852: 849: 847: 844: 842: 839: 837: 834: 832: 829: 827: 824: 823: 821: 814: 813: 811: 807: 802: 799: 797: 788: 783: 778: 774: 762: 758: 753: 748: 744: 740: 735: 730: 726: 722: 718: 711: 708: 703: 699: 694: 689: 685: 681: 677: 673: 669: 665: 661: 657: 653: 646: 643: 638: 634: 629: 624: 620: 616: 612: 608: 604: 600: 596: 589: 586: 581: 577: 572: 567: 563: 559: 555: 551: 547: 543: 539: 532: 529: 524: 520: 516: 512: 508: 504: 500: 496: 489: 486: 481: 477: 472: 467: 463: 459: 455: 451: 447: 443: 439: 432: 429: 422: 416: 412: 407: 402: 398: 394: 390: 386: 382: 377: 373: 369: 364: 359: 355: 351: 347: 343: 339: 334: 330: 326: 322: 318: 313: 308: 304: 300: 296: 291: 287: 283: 279: 275: 271: 267: 261: 257: 253: 249: 245: 242:(2): 92–112. 241: 237: 231: 227: 223: 218: 213: 209: 205: 202:(3): e00392. 201: 197: 193: 188: 184: 180: 175: 170: 166: 162: 158: 154: 150: 145: 144: 140: 136: 133: 131: 128: 126: 123: 122: 118: 116: 115: 113: 108: 104: 100: 96: 91: 83: 81: 78: 74: 70: 62: 60: 58: 54: 50: 49:Gram-positive 45: 41: 39: 34: 30: 26: 22: 803: 793: 792: 724: 720: 710: 659: 655: 645: 602: 598: 588: 545: 541: 531: 498: 494: 488: 445: 441: 431: 388: 384: 345: 341: 302: 298: 269: 265: 239: 235: 199: 195: 156: 152: 110: 106: 102: 95:Microfluidic 89: 87: 66: 43: 36: 31:) and LrgA ( 20: 18: 348:(1): 7–17. 55:as well as 820:Categories 423:References 112:S. mutants 84:Expression 25:TC# 1.E.14 796:this edit 743:1471-2180 684:1098-5336 619:1098-5530 562:0021-9193 515:0966-842X 462:1098-5530 73:apoptosis 761:22937869 702:23524683 637:19502411 580:16109930 523:12875813 480:21421752 415:16166524 372:25157079 329:34897582 321:15916614 286:24275081 256:15993836 226:26060272 119:See also 63:Function 787:Biology 752:3507848 727:: 187. 693:3648040 664:Bibcode 628:2715716 571:1196168 471:3133170 406:1251592 363:4288690 217:4462622 183:8824633 99:biofilm 77:biofilm 57:archaea 856:Holins 794:As of 773:Portal 759:  749:  741:  700:  690:  682:  635:  625:  617:  578:  568:  560:  521:  513:  478:  468:  460:  413:  403:  370:  360:  327:  319:  284:  254:  224:  214:  181:  174:178427 171:  90:cidABC 325:S2CID 130:Lysin 125:Holin 42:CidA 35:) of 810:GFDL 757:PMID 739:ISSN 698:PMID 680:ISSN 633:PMID 615:ISSN 576:PMID 558:ISSN 519:PMID 511:ISSN 476:PMID 458:ISSN 411:PMID 368:PMID 317:PMID 282:PMID 252:PMID 240:1713 222:PMID 196:mBio 179:PMID 107:lrgA 105:and 103:cidA 88:The 51:and 19:The 747:PMC 729:doi 688:PMC 672:doi 623:PMC 607:doi 603:191 566:PMC 550:doi 546:187 503:doi 466:PMC 450:doi 446:193 401:PMC 393:doi 389:187 358:PMC 350:doi 346:197 307:doi 274:doi 270:304 244:doi 212:PMC 204:doi 169:PMC 161:doi 157:178 44:and 822:: 755:. 745:. 737:. 725:12 723:. 719:. 696:. 686:. 678:. 670:. 660:79 658:. 654:. 631:. 621:. 613:. 601:. 597:. 574:. 564:. 556:. 544:. 540:. 517:. 509:. 499:11 497:. 474:. 464:. 456:. 444:. 440:. 409:. 399:. 387:. 383:. 366:. 356:. 344:. 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Index

TC# 1.E.14
TC# 1.E.14.1.2
TC# 1.E.14.1.1
Staphylococcus aureus
Gram-positive
Gram-negative bacteria
archaea
programmed cell death
apoptosis
biofilm
Microfluidic
biofilm
S. mutants
Holin
Lysin
Transporter Classification Database
"Identification of LytSR-regulated genes from Staphylococcus aureus"
doi
10.1128/jb.178.19.5810-5812.1996
PMC
178427
PMID
8824633
"Acetic Acid Acts as a Volatile Signal To Stimulate Bacterial Biofilm Formation"
doi
10.1128/mBio.00392-15
PMC
4462622
PMID
26060272

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