Knowledge (XXG)

TimeTree

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Different aspects of the Earth's environment are shown next to the timescale for comparison, including Earth impacts, solar luminosity, carbon dioxide levels, and oxygen levels. Separately, a table lists the time estimates, downloadable as a spreadsheet, from each study along with references and links to the abstracts of the original articles. Users can download the original study data as
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was brought to life using animated computer-generated imagery in scenes every 10 minutes during the 2-hour movie. The original development of TimeTree, by Hedges and Kumar, dates to the late 1990s, with initial support from NASA Astrobiology Institute. Since then, it has been supported by additional
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by either specifying a taxon (group) name or uploading a list of species or other taxa. After specifying a group name, the user can choose which taxonomic level they prefer to view. For example, with a family group name, either a species-level or genus-level timetree can be selected. Then, the
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TimeTree users can search for the names of two species, such as cat and dog, to obtain the mean and median time estimates for their divergence, in millions of years. The results also show all individual time estimates, from each study, next to a geologic timescale, indicating geologic periods.
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of a chosen taxon or user-submitted group of taxa. TimeTree has been used in public education to conceptualize the evolution of life, such as in high school settings. David Attenborough's Emmy Award-winning film and television program
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file or image for publication. Times on the tree can be explored by clicking on nodes, and obtaining tables of data pertaining to the node. The database also allows search of
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of life from published studies, and allow easy access to that information on the web or mobile device. The database permits searching for average node times between two
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Kumar, Sudhir; Suleski, Michael; Craig, Jack; Kasprowicz, Adrienne; Sanderford, Maxwell; Li, Michael; Stecher, Glen; Hedges, S. Blair (2022).
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grants from NASA, and by NSF and NIH. The current version (v5) was released in 2022 and contains data from 4,075 studies and 137,306 species.
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or higher taxa, viewing a timeline from the perspective of a taxon, which shows all divergences back to the origin of life, and building a
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Metzger KJ (2011). "Helping Students Conceptualize Species Divergence Events using the Online Tool "TimeTree: The Timescale of Life"".
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Results of a simple nodetime search in TimeTree database for the divergence time of cats and dogs in millions of years
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Hedges, S. Blair; Marin, Julie; Suleski, Michael; Paymer, Madeline; Kumar, Sudhir (2015).
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of life, generated from the TimeTree database, as a framework for the production. The
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Results from a timeline search in TimeTree for humans (Homo sapiens)
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Hedges, S. Blair; Dudley, Joel; Kumar, Sudhir (4 October 2006).
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Results of a timetree search in TimeTree for Hominidae.
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articles by author name. The entire open-access book
290:"TimeTree2: species divergence times on the iPhone" 90: 80: 68: 52: 40: 30: 350:Hedges, S. Blair; Kumar, Sudhir (2009-04-23). 288:Kumar, Sudhir; Hedges, S. Blair (2011-07-15). 8: 124:, for presenting times of divergence in the 16: 639: 248:(23). Oxford University Press: 2971–2972. 103: 36:S. Blair Hedges, Joel Dudley, Sudhir Kumar 15: 597: 574:"Molecular memories of a Cambrian fossil" 548: 472: 420: 394: 345: 343: 341: 321: 253: 356:. Oxford, UK: Oxford University Press. 225: 116:is a free public database developed by 572:Babaian, Caryn; Kumar, Sudhir (2020). 531:Babaian, Caryn; Kumar, Sudhir (2018). 283: 281: 7: 442: 440: 14: 145:used Hedges and Kumar's circular 22: 453:Molecular Biology and Evolution 383:Molecular Biology and Evolution 196:is show and can be output as a 1: 306:10.1093/bioinformatics/btr315 255:10.1093/bioinformatics/btl505 578:The American Biology Teacher 537:The American Biology Teacher 498:The American Biology Teacher 187:search, involves building a 673: 208:is presented on the site. 590:10.1525/abt.2020.82.9.586 550:10.1525/abt.2018.80.9.650 120:and Sudhir Kumar, now at 64: 48: 21: 657:Bioinformatics software 510:10.1525/abt.2011.73.2.9 465:10.1093/molbev/msac174 216: 175: 162: 405:10.1093/molbev/msv037 214: 173: 160: 353:The Timetree of Life 18: 217: 176: 163: 32:Original author(s) 363:978-0-19-953503-3 300:(14): 2023–2024. 122:Temple University 111: 110: 664: 643: 638: 637: 635:Official website 620: 619: 601: 569: 563: 562: 552: 528: 522: 521: 493: 487: 486: 476: 444: 435: 434: 424: 398: 374: 368: 367: 347: 336: 335: 325: 285: 276: 275: 257: 239: 230: 206:Timetree of Life 107: 102: 99: 97: 26: 19: 672: 671: 667: 666: 665: 663: 662: 661: 647: 646: 633: 632: 629: 624: 623: 571: 570: 566: 530: 529: 525: 495: 494: 490: 446: 445: 438: 376: 375: 371: 364: 349: 348: 339: 287: 286: 279: 237: 232: 231: 227: 222: 168: 143:Rise of Animals 118:S. Blair Hedges 94: 60: 41:Initial release 12: 11: 5: 670: 668: 660: 659: 649: 648: 645: 644: 628: 627:External links 625: 622: 621: 584:(9): 586–595. 564: 543:(9): 650–658. 523: 504:(2): 106–108. 488: 436: 389:(4): 835–845. 369: 362: 337: 294:Bioinformatics 277: 242:Bioinformatics 224: 223: 221: 218: 167: 164: 109: 108: 92: 88: 87: 84: 78: 77: 75:Bioinformatics 72: 66: 65: 62: 61: 59:v5.0 / 2022 58: 56: 54:Stable release 50: 49: 46: 45: 42: 38: 37: 34: 28: 27: 13: 10: 9: 6: 4: 3: 2: 669: 658: 655: 654: 652: 642: 636: 631: 630: 626: 617: 613: 609: 605: 600: 595: 591: 587: 583: 579: 575: 568: 565: 560: 556: 551: 546: 542: 538: 534: 527: 524: 519: 515: 511: 507: 503: 499: 492: 489: 484: 480: 475: 470: 466: 462: 458: 454: 450: 443: 441: 437: 432: 428: 423: 418: 414: 410: 406: 402: 397: 392: 388: 384: 380: 373: 370: 365: 359: 355: 354: 346: 344: 342: 338: 333: 329: 324: 319: 315: 311: 307: 303: 299: 295: 291: 284: 282: 278: 273: 269: 265: 261: 256: 251: 247: 243: 236: 229: 226: 219: 213: 209: 207: 203: 199: 195: 190: 186: 182: 172: 165: 159: 155: 152: 148: 144: 139: 135: 131: 127: 123: 119: 115: 106: 101: 93: 89: 85: 83: 79: 76: 73: 71: 67: 63: 57: 55: 51: 47: 43: 39: 35: 33: 29: 25: 20: 581: 577: 567: 540: 536: 526: 501: 497: 491: 456: 452: 386: 382: 372: 352: 297: 293: 245: 241: 228: 205: 177: 126:tree of life 113: 112: 220:References 616:227304077 413:1537-1719 396:1412.4312 314:1367-4803 264:1367-4811 98:.timetree 651:Category 608:33967280 559:91951552 518:85026876 483:35932227 431:25739733 332:21622662 272:17021158 202:timetree 194:timetree 189:timetree 185:timetree 166:Features 151:timetree 147:timetree 138:timetree 130:timetree 114:TimeTree 86:Freeware 17:TimeTree 599:8104914 474:9400175 422:4379413 323:3129528 134:species 91:Website 82:License 614:  606:  596:  557:  516:  481:  471:  429:  419:  411:  360:  330:  320:  312:  270:  262:  198:Newick 181:Newick 612:S2CID 555:S2CID 514:S2CID 459:(8). 391:arXiv 238:(PDF) 604:PMID 479:PMID 427:PMID 409:ISSN 358:ISBN 328:PMID 310:ISSN 268:PMID 260:ISSN 100:.org 70:Type 44:2006 594:PMC 586:doi 545:doi 506:doi 469:PMC 461:doi 417:PMC 401:doi 318:PMC 302:doi 250:doi 96:www 653:: 610:. 602:. 592:. 582:82 580:. 576:. 553:. 541:80 539:. 535:. 512:. 502:73 500:. 477:. 467:. 457:39 455:. 451:. 439:^ 425:. 415:. 407:. 399:. 387:32 385:. 381:. 340:^ 326:. 316:. 308:. 298:27 296:. 292:. 280:^ 266:. 258:. 246:22 244:. 240:. 618:. 588:: 561:. 547:: 520:. 508:: 485:. 463:: 433:. 403:: 393:: 366:. 334:. 304:: 274:. 252::

Index


Original author(s)
Stable release
Type
Bioinformatics
License
www.timetree.org
Edit this at Wikidata
S. Blair Hedges
Temple University
tree of life
timetree
species
timetree
Rise of Animals
timetree
timetree


Newick
timetree
timetree
timetree
Newick
timetree

"TimeTree: a public knowledge-base of divergence times among organisms"
doi
10.1093/bioinformatics/btl505
ISSN

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