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Togavirus 5′ plus strand cis-regulatory element

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Hyde JL, Gardner CL, Kimura T, White JP, Liu G, Trobaugh DW, Huang C, Tonelli M, Paessler S, Takeda K, Klimstra WB, Amarasinghe GK, Diamond MS (February 2014).
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belongs to the family Togaviridae. Alpha viruses contain secondary structural motifs in the 5′ UTR that allow them to avoid detection by
182:"Cis-acting RNA elements at the 5′ end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesis" 133: 80: 35: 104: 31: 298: 306: 260: 211: 111: 99: 250: 242: 201: 193: 87: 314: 255: 230: 206: 181: 357: 137: 310: 127: 197: 144: 283: 246: 264: 215: 231:"A viral RNA structural element alters host recognition of nonself RNA" 25: 148: 92: 62: 287: 136:
which is thought to be essential for both plus and minus strand
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Page for Togavirus 5′ plus strand cis-regulatory element
318: 110: 98: 86: 73: 68: 56: 48: 43: 18: 19:Togavirus 5′ plus strand cis-regulatory element 338: 8: 180:Frolov I, Hardy R, Rice CM (November 2001). 345: 331: 24: 254: 205: 172: 15: 130:5′ plus strand cis-regulatory element 7: 369:Molecular and cellular biology stubs 295: 293: 161:Rubella virus 3′ cis-acting element 14: 297: 1: 317:. You can help Knowledge by 364:Cis-regulatory RNA elements 385: 292: 198:10.1017/S135583820101010X 23: 247:10.1126/science.1248465 36:sequence conservation 32:secondary structure 326: 325: 241:(6172): 783–787. 192:(11): 1638–1651. 123: 122: 376: 347: 340: 333: 301: 294: 269: 268: 258: 226: 220: 219: 209: 177: 28: 16: 384: 383: 379: 378: 377: 375: 374: 373: 354: 353: 352: 351: 278: 273: 272: 228: 227: 223: 179: 178: 174: 169: 157: 39: 12: 11: 5: 382: 380: 372: 371: 366: 356: 355: 350: 349: 342: 335: 327: 324: 323: 302: 291: 290: 281: 277: 276:External links 274: 271: 270: 221: 171: 170: 168: 165: 164: 163: 156: 153: 121: 120: 115: 108: 107: 102: 96: 95: 90: 84: 83: 78: 71: 70: 66: 65: 60: 54: 53: 50: 46: 45: 41: 40: 29: 21: 20: 13: 10: 9: 6: 4: 3: 2: 381: 370: 367: 365: 362: 361: 359: 348: 343: 341: 336: 334: 329: 328: 322: 320: 316: 313:article is a 312: 308: 303: 300: 296: 289: 285: 282: 280: 279: 275: 266: 262: 257: 252: 248: 244: 240: 236: 232: 225: 222: 217: 213: 208: 203: 199: 195: 191: 187: 183: 176: 173: 166: 162: 159: 158: 154: 152: 150: 146: 141: 139: 138:RNA synthesis 135: 131: 129: 119: 116: 113: 109: 106: 103: 101: 97: 94: 91: 89: 85: 82: 79: 76: 72: 67: 64: 61: 59: 55: 51: 47: 42: 38:of Toga_5_CRE 37: 33: 27: 22: 17: 319:expanding it 311:cell biology 304: 238: 234: 224: 189: 185: 175: 142: 126: 124: 134:RNA element 44:Identifiers 358:Categories 167:References 145:Alphavirus 114:structures 105:SO:0000233 69:Other data 52:Toga_5_CRE 30:Predicted 307:molecular 128:Togavirus 88:Domain(s) 265:24482115 216:11720292 155:See also 256:4209899 235:Science 207:1370205 93:Viruses 81:Cis-reg 63:RF00470 263:  253:  214:  204:  143:Genus 132:is an 49:Symbol 305:This 149:IFIT1 315:stub 288:Rfam 261:PMID 212:PMID 125:The 118:PDBe 77:type 58:Rfam 34:and 309:or 286:at 251:PMC 243:doi 239:343 202:PMC 194:doi 186:RNA 112:PDB 75:RNA 360:: 259:. 249:. 237:. 233:. 210:. 200:. 188:. 184:. 151:. 140:. 100:SO 346:e 339:t 332:v 321:. 267:. 245:: 218:. 196:: 190:7

Index


secondary structure
sequence conservation
Rfam
RF00470
RNA
Cis-reg
Domain(s)
Viruses
SO
SO:0000233
PDB
PDBe
Togavirus
RNA element
RNA synthesis
Alphavirus
IFIT1
Rubella virus 3′ cis-acting element
"Cis-acting RNA elements at the 5′ end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesis"
doi
10.1017/S135583820101010X
PMC
1370205
PMID
11720292
"A viral RNA structural element alters host recognition of nonself RNA"
doi
10.1126/science.1248465
PMC

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