Knowledge

Vargulin

Source ๐Ÿ“

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Morin JG (2011). "Based on a review of the data, use of the term 'cypridinid' solves the Cypridina/Vargula dilemma for naming the constituents of the luminescent system of ostracods in the family Cypridinidae".
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InChI=1S/C22H27N7O/c1-3-13(2)19-21(30)29-12-18(15-11-26-16-8-5-4-7-14(15)16)27-17(20(29)28-19)9-6-10-25-22(23)24/h4-5,7-8,11-13,26-27H,3,6,9-10H2,1-2H3,(H4,23,24,25)/t13-/m0/s1
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Oba, Y, Kato, S, Ojika, M, Inouye, S (2002). "Biosynthesis of luciferin in the sea firefly, Cypridina hilgendorfii: l-tryptophan is a component in Cypridina luciferin".
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InChI=1S/C22H27N7O/c1-3-13(2)19-21(30)29-12-18(15-11-26-16-8-5-4-7-14(15)16)27-17(20(29)28-19)9-6-10-25-22(23)24/h4-5,7-8,11-13,26-27H,3,6,9-10H2,1-2H3,(H4,23,24,25)
790: 396:. These bottom dwelling ostracods emit a light stream into water when disturbed presumably to deter predation. Vargulin is also used by the midshipman fish, 252: 450:, to produce blue light at 462 nm (max emission, detected with a 425 to 525 nm filter). The vargulin does not cross react with luciferases using 618: 493:
Although less stable, the Cypridina system is useful because can be used in multiplex assays with other (red-emitting) luciferin assays.
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to allow it to be separated from the water-soluble components. The compound was first isolated and purified to crystals by
160: 684: 610: 181: 350: 928: 908: 730:, T, Hirata Y, Shiromura O, Johnson FH (1966). "Cypridina bioluminescence. I. Structure of Cypridina luciferin". 893: 510:
Campbell AK, Herring PJ (1990). "Imidazolopyrazine bioluminescence in copepods and other marine organisms".
482: 386: 443: 38: 872: 799: 519: 392: 198: 903: 888: 70: 786:"Cloning and expression of cDNA for the luciferase from the marine ostracod Vargula hilgendorfii" 543: 410:
A partial extraction procedure was developed in 1935 which involved reacting the compound with
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suggest that the compound is synthesized in the animal from three amino-acids:
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Except where otherwise noted, data are given for materials in their
25: 103: 93: 418:. The structure of the compound was confirmed some years later. 466:
Vargulin (with the associated luciferase) has applications in
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Cypridina luciferin, cypridinid luciferin, Vargula luciferin
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after luciferase have been genetically introduced in cells,
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O=C\3N4\C=C(\c2c1ccccc1c2)N/C(=C4/N=C/3(C)CC)CCC/N=C(\N)N
518:(2). Springer Science and Business Media LLC: 219โ€“225. 338: 485:, that is used in the vargulin/luciferase reaction ( 607:Bioluminescence: Chemical Principles and Methods 148: 791:Proceedings of the National Academy of Sciences 79: 50:-imidazo[2, 1-c]pyrazin-8-yl]propyl]guanidine 8: 474:in a variety of assays, to report gene or 201: 123: 17: 821: 811: 703: 692:Bulletin of the Chemical Society of Japan 683:Shimomura, O, Goto, T, Hirata, Y (1957). 659: 168: 784:Thompson EM, Nagata S, Tsuji FI (1989). 502: 257: 222: 197: 229:Key: ZWPWSXGBDMGKKS-UHFFFAOYSA-N 7: 239:Key: ZWPWSXGBDMGKKS-UHFFFAOYAG 139: 14: 685:"Crystalline Cypridina Luciferin" 640:The Journal of General Physiology 866: 328: 293: 287: 24: 324:(at 25 ยฐC , 100 kPa). 299: 281: 1: 771:10.1016/S0040-4039(02)00257-5 744:10.1016/S0040-4039(01)82806-9 442:Vargulin is oxidized by the 611:World Scientific Publishing 945: 318: 268: 248: 213: 63: 55: 37: 32: 23: 924:Microbiology techniques 813:10.1073/pnas.86.17.6567 846:"Luciferase Reporters" 605:Shimomura, O. (2006). 387:Cypridina hilgendorfii 919:Laboratory techniques 634:Anderson, RS (1935). 487:cell viability assays 875:at Wikimedia Commons 652:10.1085/jgp.19.2.301 393:Vargula hilgendorfii 367:Cypridinid luciferin 46:-indol-3-yl)-3-oxo-7 804:1989PNAS...86.6567T 759:Tetrahedron Letters 705:10.1246/bcsj.30.929 524:1990MarBi.104..219C 420:Feeding experiments 371:Cypridina luciferin 314: gยทmol 20: 532:10.1007/bf01313261 444:Vargula luciferase 351:Infobox references 18: 871:Media related to 765:(12): 2389โ€“2392. 738:(29): 3427โ€“3436. 620:978-981-256-801-4 570:(1). Wiley: 1โ€“4. 456:Firefly luciferin 375:Vargula luciferin 359:Chemical compound 357: 356: 182:CompTox Dashboard 105:Interactive image 936: 929:Toxicology tests 909:Imidazopyrazines 870: 854: 853: 850:thermofisher.com 842: 836: 835: 825: 815: 781: 775: 774: 754: 748: 747: 732:Tetrahedron Lett 724: 718: 717: 707: 689: 680: 674: 673: 663: 631: 625: 624: 602: 596: 595: 576:10.1002/bio.1282 558: 552: 551: 507: 446:, a 62 kDa 412:benzoyl chloride 341: 335: 332: 331: 313: 301: 295: 289: 283: 276:Chemical formula 206: 205: 190: 188: 172: 152: 141: 127: 107: 83: 28: 21: 944: 943: 939: 938: 937: 935: 934: 933: 894:Bioluminescence 879: 878: 863: 858: 857: 844: 843: 839: 798:(17): 6567โ€“71. 783: 782: 778: 756: 755: 751: 726: 725: 721: 687: 682: 681: 677: 633: 632: 628: 621: 604: 603: 599: 560: 559: 555: 509: 508: 504: 499: 476:gene expression 464: 440: 416:Osamu Shimomura 408: 360: 353: 348: 347: 346:  ?) 337: 333: 329: 325: 311: 298: 292: 286: 278: 264: 261: 256: 255: 244: 241: 240: 237: 231: 230: 227: 221: 220: 209: 191: 184: 175: 155: 142: 130: 110: 97: 86: 73: 59: 51: 12: 11: 5: 942: 940: 932: 931: 926: 921: 916: 911: 906: 901: 896: 891: 881: 880: 877: 876: 862: 861:External links 859: 856: 855: 837: 776: 749: 719: 698:(8): 929โ€“933. 675: 626: 619: 597: 553: 512:Marine Biology 501: 500: 498: 495: 491: 490: 479: 463: 460: 452:coelenterazine 439: 436: 407: 404: 365:, also called 358: 355: 354: 349: 327: 326: 322:standard state 319: 316: 315: 309: 303: 302: 296: 290: 284: 279: 274: 271: 270: 266: 265: 263: 262: 259: 251: 250: 249: 246: 245: 243: 242: 238: 235: 234: 232: 228: 225: 224: 216: 215: 214: 211: 210: 208: 207: 199:DTXSID40331446 194: 192: 180: 177: 176: 174: 173: 165: 163: 157: 156: 154: 153: 145: 143: 135: 132: 131: 129: 128: 120: 118: 112: 111: 109: 108: 100: 98: 91: 88: 87: 85: 84: 76: 74: 69: 66: 65: 61: 60: 57: 53: 52: 41: 35: 34: 30: 29: 13: 10: 9: 6: 4: 3: 2: 941: 930: 927: 925: 922: 920: 917: 915: 912: 910: 907: 905: 902: 900: 897: 895: 892: 890: 887: 886: 884: 874: 869: 865: 864: 860: 851: 847: 841: 838: 833: 829: 824: 819: 814: 809: 805: 801: 797: 793: 792: 787: 780: 777: 772: 768: 764: 760: 753: 750: 745: 741: 737: 733: 729: 728:Kishi Y, Goto 723: 720: 715: 711: 706: 701: 697: 693: 686: 679: 676: 671: 667: 662: 657: 653: 649: 645: 641: 637: 630: 627: 622: 616: 612: 608: 601: 598: 593: 589: 585: 581: 577: 573: 569: 565: 557: 554: 549: 545: 541: 537: 533: 529: 525: 521: 517: 513: 506: 503: 496: 494: 488: 484: 480: 477: 473: 472: 471: 469: 468:biotechnology 461: 459: 457: 453: 449: 445: 437: 435: 433: 429: 425: 421: 417: 413: 405: 403: 401: 400: 395: 394: 390:, also named 389: 388: 384: 381:found in the 380: 376: 372: 368: 364: 352: 345: 340: 323: 317: 310: 308: 305: 304: 280: 277: 273: 272: 267: 258: 254: 247: 233: 223: 219: 212: 204: 200: 196: 195: 193: 183: 179: 178: 171: 167: 166: 164: 162: 159: 158: 151: 147: 146: 144: 138: 134: 133: 126: 122: 121: 119: 117: 114: 113: 106: 102: 101: 99: 95: 90: 89: 82: 78: 77: 75: 72: 68: 67: 62: 54: 49: 45: 40: 36: 31: 27: 22: 16: 849: 840: 795: 789: 779: 762: 758: 752: 735: 731: 722: 695: 691: 678: 646:(2): 301โ€“5. 643: 639: 629: 606: 600: 567: 564:Luminescence 563: 556: 515: 511: 505: 492: 465: 441: 438:Biochemistry 409: 398: 391: 385: 374: 370: 366: 362: 361: 64:Identifiers 56:Other names 47: 43: 15: 714:10069/20882 269:Properties 904:Guanidines 889:Luciferins 883:Categories 497:References 481:to detect 428:isoleucine 424:tryptophan 399:Porichthys 307:Molar mass 170:761TM14Y84 116:ChemSpider 92:3D model ( 71:CAS Number 39:IUPAC name 584:1522-7235 540:0025-3162 379:luciferin 377:, is the 150:135398684 81:7273-34-9 19:Vargulin 873:Vargulin 670:19872927 592:19862683 548:84250053 432:arginine 383:ostracod 363:Vargulin 914:Lactams 899:Indoles 832:2771943 800:Bibcode 661:2141430 520:Bibcode 406:History 344:what is 342: ( 312:405.506 137:PubChem 42:2--6-(1 830:  823:297885 820:  668:  658:  617:  590:  582:  546:  538:  448:enzyme 430:, and 339:verify 336:  253:SMILES 125:388868 33:Names 688:(PDF) 544:S2CID 373:, or 218:InChI 94:JSmol 828:PMID 666:PMID 615:ISBN 588:PMID 580:ISSN 536:ISSN 462:Uses 161:UNII 818:PMC 808:doi 767:doi 740:doi 710:hdl 700:doi 656:PMC 648:doi 572:doi 528:doi 516:104 483:ATP 454:or 187:EPA 140:CID 885:: 848:. 826:. 816:. 806:. 796:86 794:. 788:. 763:43 761:. 734:. 708:. 696:30 694:. 690:. 664:. 654:. 644:19 642:. 638:. 613:. 609:. 586:. 578:. 568:26 566:. 542:. 534:. 526:. 514:. 489:). 470:: 458:. 434:. 426:, 402:. 369:, 291:27 285:22 852:. 834:. 810:: 802:: 773:. 769:: 746:. 742:: 736:7 716:. 712:: 702:: 672:. 650:: 623:. 594:. 574:: 550:. 530:: 522:: 334:N 300:O 297:7 294:N 288:H 282:C 189:) 185:( 96:) 48:H 44:H

Index


IUPAC name
CAS Number
7273-34-9
JSmol
Interactive image
ChemSpider
388868
PubChem
135398684
UNII
761TM14Y84
CompTox Dashboard
DTXSID40331446
Edit this at Wikidata
InChI
SMILES
Chemical formula
Molar mass
standard state
verify
what is
Infobox references
luciferin
ostracod
Cypridina hilgendorfii
Vargula hilgendorfii
Porichthys
benzoyl chloride
Osamu Shimomura

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