Knowledge (XXG)

Toponome

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along a cell surface membrane. This spatial order is periodically repeated when the cell tries to enter the exploratory state from the spherical state (spatial periodicity). This spatial toponome code is hierarchically organized with lead biomolecule(s), anti-colocated (absent) biomolecule(s) and wildcard molecules which are variably associated with the lead biomolecule(s). It has been shown that inhibition of lead molecule(s) in a surface membrane leads to disassembly of the corresponding biomolecular network and loss of function.
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toponome provides the spatial protein interaction code for the execution of a cell movement, a "code of conduct". This is intrinsically dependent on the specific spatial arrangement of similar and dissimilar compositions of supermolecules (compositional periodicity) with a specific spatial order
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Schubert, Walter; Bonnekoh, Bernd; Pommer, Ansgar J; Philipsen, Lars; Böckelmann, Raik; Malykh, Yanina; Gollnick, Harald; Friedenberger, Manuela; Bode, Marcus; Dress, Andreas W M (1 October 2006). "Analyzing proteome topology and function by automated multidimensional fluorescence microscopy".
67:" refers to the study of the toponome. It was introduced by Walter Schubert in 2003. It addresses the fact that the network of biomolecules in cells and tissues follows 148: 110: 281:"Systematic, spatial imaging of large multimolecular assemblies and the emerging principles of supramolecular order in biological systems" 59:
in one sample (tissue section or cell sample at high subcellular resolution). The term "toponome" is derived from the
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Schubert, Walter (15 September 2010). "On the origin of cell functions encoded in the toponome".
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nouns "topos" (τόπος: "place, position") and "nomos" (νόμος: "law"), and the term "
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rules enabling coordinated actions. For example, the
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Topological Proteomics, Toponomics, MELK-Technology
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Knowledge (XXG) talk:Articles for creation/Toponome
8: 304: 97:. Springer New York. pp. 2191–2212. 85: 239: 237: 192: 190: 188: 174: 164: 126: 124: 122: 55:in situ able to co-map many thousand 7: 135:. Vol. 83. pp. 189–209. 93:Schubert, W (2013). "Toponomics". 25: 279:Schubert, Walter (January 2014). 285:Journal of Molecular Recognition 95:Encyclopedia of Systems Biology 53:imaging cycler microscopy (ICM) 51:. It is mapped and decoded by 1: 258:10.1016/j.jbiotec.2010.03.009 103:10.1007/978-1-4419-9863-7_631 43:in morphologically intact 366: 246:Journal of Biotechnology 141:10.1007/3-540-36459-5_8 200:Nature Biotechnology 131:Schubert, W (2003). 206:(10): 1270–1278. 150:978-3-540-00546-9 112:978-1-4419-9862-0 16:(Redirected from 357: 319: 318: 308: 297:10.1002/jmr.2326 276: 270: 269: 241: 232: 231: 194: 183: 182: 176: 172: 170: 162: 128: 117: 116: 90: 21: 365: 364: 360: 359: 358: 356: 355: 354: 335:Systems biology 325: 324: 323: 322: 278: 277: 273: 243: 242: 235: 212:10.1038/nbt1250 196: 195: 186: 173: 163: 151: 130: 129: 120: 113: 92: 91: 87: 82: 33:spatial network 23: 22: 15: 12: 11: 5: 363: 361: 353: 352: 347: 342: 340:Bioinformatics 337: 327: 326: 321: 320: 271: 252:(4): 252–259. 233: 184: 175:|journal= 149: 118: 111: 84: 83: 81: 78: 57:supermolecules 24: 14: 13: 10: 9: 6: 4: 3: 2: 362: 351: 348: 346: 343: 341: 338: 336: 333: 332: 330: 316: 312: 307: 302: 298: 294: 290: 286: 282: 275: 272: 267: 263: 259: 255: 251: 247: 240: 238: 234: 229: 225: 221: 217: 213: 209: 205: 201: 193: 191: 189: 185: 180: 168: 160: 156: 152: 146: 142: 138: 134: 127: 125: 123: 119: 114: 108: 104: 100: 96: 89: 86: 79: 77: 74: 70: 66: 62: 61:ancient Greek 58: 54: 50: 46: 42: 38: 34: 30: 19: 288: 284: 274: 249: 245: 203: 199: 132: 94: 88: 73:cell surface 41:biomolecules 28: 26: 291:(1): 3–18. 69:topological 329:Categories 65:toponomics 39:and other 177:ignored ( 167:cite book 80:Citations 350:Topology 315:24375580 266:20362632 228:30436820 220:17013374 159:12934931 37:proteins 35:code of 29:toponome 306:4283051 49:tissues 31:is the 313:  303:  264:  226:  218:  157:  147:  109:  345:Omics 224:S2CID 45:cells 311:PMID 262:PMID 216:PMID 179:help 155:PMID 145:ISBN 107:ISBN 47:and 27:The 301:PMC 293:doi 254:doi 250:149 208:doi 137:doi 99:doi 331:: 309:. 299:. 289:27 287:. 283:. 260:. 248:. 236:^ 222:. 214:. 204:24 202:. 187:^ 171:: 169:}} 165:{{ 153:. 143:. 121:^ 105:. 317:. 295:: 268:. 256:: 230:. 210:: 181:) 161:. 139:: 115:. 101:: 20:)

Index

Knowledge (XXG) talk:Articles for creation/Toponome
spatial network
proteins
biomolecules
cells
tissues
imaging cycler microscopy (ICM)
supermolecules
ancient Greek
toponomics
topological
cell surface
doi
10.1007/978-1-4419-9863-7_631
ISBN
978-1-4419-9862-0



doi
10.1007/3-540-36459-5_8
ISBN
978-3-540-00546-9
PMID
12934931
cite book
help


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