Knowledge (XXG)

Proteopedia

Source 📝

160:. It employs a scene-authoring tool so that users do not have to learn JSmol script language to create customized molecular scenes. Custom scenes are easily attached to "green links" in descriptive text that display those scenes in JSmol. A web browser is all that is needed to access the site and the 3D information; no viewers are required to be installed. 329:
Prilusky, J; Hodis, E.; Canner, D.; Decatur, W. A.; Oberholser, K.; Martz, E.; Berchanski, A.; Harel, M.; Sussman, J. L. (Aug 2011). "Proteopedia: A status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules".
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Hodis E, Prilusky J, Sussman JL (2010). "Proteopedia: A collaborative, virtual 3D web-resource for protein and biomolecule structure and function".
409:"Web Gems Introducing the winners of the first annual Labbies, our prizes for the best web-based multimedia by labs: Website Winner:Proteopedia" 486: 496: 27: 408: 178: 204:"Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules" 182: 49: 432:
Very absorbing. Kept me looking and playing (and learning) with it for a long time. Very informative and a good resource.
491: 476: 255:"Proteopedia.Org: a scientific "Wiki" bridging the rift between 3D structure and function of biomacromolecules" 165: 141: 137: 347: 311: 276: 235: 133: 365: 339: 303: 266: 225: 215: 59: 230: 203: 149: 420: 393: 470: 379: 26: 343: 145: 220: 77: 37: 351: 315: 280: 239: 181:. Proteopedia is hosted at the Israel Structural Proteomics Center at the 121: 117: 307: 271: 254: 163:
Proteopedia was the winner of the 2010 award for the best website by
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Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL (2008).
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The site contains a page for all of the entries in the
136:(PDB), as well as pages that are more descriptive of 99: 91: 83: 73: 65: 55: 43: 33: 177:All user-added content is free and covered by the 69:Joel L. Sussman, Eran Hodis, and Jaime Prilusky 16:3D encyclopedia of proteins and other molecules 8: 296:Biochemistry and Molecular Biology Education 19: 156:view that highlights functional sites and 25: 18: 445:"The Israel Structural Proteomics Center" 270: 229: 219: 194: 7: 482:Creative Commons-licensed databases 14: 179:GNU Free Documentation License 1: 332:Journal of Structural Biology 183:Weizmann Institute of Science 487:Israeli online encyclopedias 407:Luiggi C (September 2010). 513: 103:Perpetual work-in-progress 344:10.1016/j.jsb.2011.04.011 24: 497:Encyclopedias of science 221:10.1186/gb-2008-9-8-r121 419:(9): 47. Archived from 366:"Acetylcholinesterase" 116:, 3D encyclopedia of 142:acetylcholinesterase 462:Proteopedia website 447:. 12 November 2015. 140:in general such as 100:Current status 50:Online encyclopedia 21: 492:MediaWiki websites 138:protein structures 477:Protein databases 308:10.1002/bmb.20431 272:10.1002/bip.21126 134:Protein Data Bank 107: 106: 56:Available in 504: 449: 448: 441: 435: 434: 429: 428: 404: 398: 397: 394:"Photosystem II" 390: 384: 383: 376: 370: 369: 362: 356: 355: 326: 320: 319: 291: 285: 284: 274: 253:Martz E (2009). 250: 244: 243: 233: 223: 199: 34:Type of business 29: 22: 512: 511: 507: 506: 505: 503: 502: 501: 467: 466: 458: 453: 452: 443: 442: 438: 426: 424: 406: 405: 401: 392: 391: 387: 378: 377: 373: 364: 363: 359: 328: 327: 323: 293: 292: 288: 252: 251: 247: 201: 200: 196: 191: 175: 173:Licensing terms 130: 78:proteopedia.org 66:Created by 46: 17: 12: 11: 5: 510: 508: 500: 499: 494: 489: 484: 479: 469: 468: 465: 464: 457: 456:External links 454: 451: 450: 436: 399: 396:. Proteopedia. 385: 382:. Proteopedia. 371: 368:. Proteopedia. 357: 338:(2): 244–252. 321: 286: 245: 193: 192: 190: 187: 174: 171: 150:photosystem II 129: 126: 105: 104: 101: 97: 96: 93: 89: 88: 85: 81: 80: 75: 71: 70: 67: 63: 62: 57: 53: 52: 47: 44: 41: 40: 35: 31: 30: 15: 13: 10: 9: 6: 4: 3: 2: 509: 498: 495: 493: 490: 488: 485: 483: 480: 478: 475: 474: 472: 463: 460: 459: 455: 446: 440: 437: 433: 423:on 2011-04-12 422: 418: 414: 413:The Scientist 410: 403: 400: 395: 389: 386: 381: 375: 372: 367: 361: 358: 353: 349: 345: 341: 337: 333: 325: 322: 317: 313: 309: 305: 301: 297: 290: 287: 282: 278: 273: 268: 264: 260: 256: 249: 246: 241: 237: 232: 227: 222: 217: 213: 209: 205: 198: 195: 188: 186: 184: 180: 172: 170: 168: 167: 166:The Scientist 161: 159: 155: 151: 147: 143: 139: 135: 127: 125: 123: 119: 115: 111: 102: 98: 94: 90: 86: 82: 79: 76: 72: 68: 64: 61: 58: 54: 51: 48: 42: 39: 36: 32: 28: 23: 439: 431: 425:. Retrieved 421:the original 416: 412: 402: 388: 380:"Hemoglobin" 374: 360: 335: 331: 324: 302:(5): 341–2. 299: 295: 289: 262: 258: 248: 211: 207: 197: 176: 164: 162: 131: 109: 108: 45:Type of site 265:(1): 76–7. 259:Biopolymers 214:(8): R121. 208:Genome Biol 110:Proteopedia 20:Proteopedia 471:Categories 427:2010-12-15 189:References 169:magazine. 148:, and the 146:hemoglobin 120:and other 84:Commercial 122:molecules 38:Nonprofit 352:21536137 316:21567857 281:19117028 240:18673581 118:proteins 92:Launched 231:2575511 158:ligands 152:with a 128:Website 60:English 350:  314:  279:  238:  228:  112:is a 348:PMID 312:PMID 277:PMID 236:PMID 154:Jmol 114:wiki 95:2007 340:doi 336:175 304:doi 267:doi 226:PMC 216:doi 74:URL 473:: 430:. 417:24 415:. 411:. 346:. 334:. 310:. 300:38 298:. 275:. 263:92 261:. 257:. 234:. 224:. 210:. 206:. 185:. 144:, 124:. 87:No 354:. 342:: 318:. 306:: 283:. 269:: 242:. 218:: 212:9

Index


Nonprofit
Online encyclopedia
English
proteopedia.org
wiki
proteins
molecules
Protein Data Bank
protein structures
acetylcholinesterase
hemoglobin
photosystem II
Jmol
ligands
The Scientist
GNU Free Documentation License
Weizmann Institute of Science
"Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules"
doi
10.1186/gb-2008-9-8-r121
PMC
2575511
PMID
18673581
"Proteopedia.Org: a scientific "Wiki" bridging the rift between 3D structure and function of biomacromolecules"
doi
10.1002/bip.21126
PMID
19117028

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