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Minimum information about a microarray experiment

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Brazma, Alvis; Hingamp, Pascal; Quackenbush, John; Sherlock, Gavin; Spellman, Paul; Stoeckert, Chris; Aach, John; Ansorge, Wilhelm; Ball, Catherine A.; Causton, Helen C.; Gaasterland, Terry; Glenisson, Patrick; Holstege, Frank C.P.; Kim, Irene F.; Markowitz, Victor; Matese, John C.; Parkinson, Helen;
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unambiguously and to potentially reproduce the experiment. While the standard defines the content required for compliant reports, it does not specify the format in which this data should be presented. MIAME describes the minimum information required to ensure that microarray data can be easily
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used to represent this data, as well as both public and subscription-based repositories for such experiments. Additionally, software exists to aid the preparation of MIAME-compliant reports.
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Robinson, Alan; Sarkans, Ugis; Schulze-Kremer, Steffen; Stewart, Jason; Taylor, Ronald; Vilo, Jaak; Vingron, Martin (December 2001).
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interpreted and that results derived from its analysis can be independently verified. There are a number of
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MIAME is intended to specify all the information necessary to interpret the results of the
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Unsourced material may be challenged and removed. 137:Minimum information about a microarray experiment 679: 292: 8: 686: 672: 664: 485: 447:Precursor mRNA (pre-mRNA / hnRNA) 382: 299: 285: 277: 166:MIAME revolves around six key components: 27:For more gene expression terminology, see 240: 178:, array annotations, and data protocols. 124:Learn how and when to remove this message 187: 467:Histone acetylation and deacetylation 7: 532:Ribosome-nascent chain complex (RNC) 62:adding citations to reliable sources 1035:Generalized randomized block design 25: 1086:Sequential probability ratio test 29:Glossary of gene expression terms 1109: 1011:Polynomial and rational modeling 38: 537:Post-translational modification 143:) is a standard created by the 49:needs additional citations for 1147:Biochemistry detection methods 778:Replication versus subsampling 1: 1005:Response surface methodology 913:Analysis of variance (Anova) 1075:Randomized controlled trial 1173: 26: 1094: 1061:Repeated measures design 773:Restricted randomization 598:sequestration (P-bodies) 576:Gene regulatory network 1116:Mathematics portal 878:Ordinary least squares 581:cis-regulatory element 174:, sample annotations, 713:Scientific experiment 695:Design of experiments 987:Fractional factorial 603:alternative splicing 593:Post-transcriptional 419:Transcription factor 200:FGED Society website 58:improve this article 1152:Genetics techniques 1121:Statistical outline 1081:Sequential analysis 1046:Graeco-Latin square 955:Multiple comparison 902:Hierarchical model: 527:Transfer RNA (tRNA) 176:experimental design 1126:Statistical topics 718:Statistical design 641:Influential people 620:Post-translational 439:Post-transcription 242:10.1038/ng1201-365 1134: 1133: 1021:Central composite 919:Cochran's theorem 873:Linear regression 850:Nuisance variable 763:Random assignment 740:Experimental unit 661: 660: 545: 544: 475: 474: 351:Special transfers 196:"MIAME home page" 134: 133: 126: 108: 16:(Redirected from 1164: 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Index

MIAME
Glossary of gene expression terms

verification
improve this article
adding citations to reliable sources
"Minimum information about a microarray experiment"
news
newspapers
books
scholar
JSTOR
Learn how and when to remove this message
FGED Society
microarray
experiment
file formats
raw data
normalized data
experimental design
"MIAME home page"


"Minimum information about a microarray experiment (MIAME)—toward standards for microarray data"
doi
10.1038/ng1201-365
ISSN
1061-4036
PMID
11726920

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