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Mathematical modelling of infectious diseases

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2068: 197:"Stochastic" means being or having a random variable. A stochastic model is a tool for estimating probability distributions of potential outcomes by allowing for random variation in one or more inputs over time. Stochastic models depend on the chance variations in risk of exposure, disease and other illness dynamics. Statistical agent-level disease dissemination in small or large populations can be determined by stochastic methods. 1179: 1043: 2062: 81:, in 1662. The bills he studied were listings of numbers and causes of deaths published weekly. Graunt's analysis of causes of death is considered the beginning of the "theory of competing risks" which according to Daley and Gani is "a theory that is now well established among modern epidemiologists". 1943: 252:
on top of its contact network. The combination of disease dynamics under the influence of interventions, if any, on a contact network may be modeled with another network, known as a transmission network. In a transmission network, all the links are responsible for transmitting the disease. If such a
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is widespread. For example, most people in London only make contact with other Londoners. Further, within London then there are smaller subgroups, such as the Turkish community or teenagers (just to give two examples), who mix with each other more than people outside their group. However, homogeneous
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and is called the contact network. Every node in a contact network is a representation of an individual and each link (edge) between a pair of nodes represents the contact between them. Links in the contact networks may be used to transmit the disease between the individuals and each disease has its
149:. Epidemiological ABMs, in spite of their complexity and requiring high computational power, have been criticized for simplifying and unrealistic assumptions. Still, they can be useful in informing decisions regarding mitigation and suppression measures in cases when ABMs are accurately calibrated. 205:
When dealing with large populations, as in the case of tuberculosis, deterministic or compartmental mathematical models are often used. In a deterministic model, individuals in the population are assigned to different subgroups or compartments, each representing a specific stage of the epidemic.
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If a vaccination program causes the proportion of immune individuals in a population to exceed the critical threshold for a significant length of time, transmission of the infectious disease in that population will stop. If elimination occurs everywhere at the same time, then this can lead to
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The transition rates from one class to another are mathematically expressed as derivatives, hence the model is formulated using differential equations. While building such models, it must be assumed that the population size in a compartment is differentiable with respect to time and that the
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There are many modifications of the SIR model, including those that include births and deaths, where upon recovery there is no immunity (SIS model), where immunity lasts only for a short period of time (SIRS), where there is a latent period of the disease where the person is not infectious
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where 1 person tags 2, those 2 tag 4 others who've never been tagged and so on. As this game progresses it becomes increasing frenetic as the tagged run past the previously tagged to hunt down those who have never been tagged. Thus this model of an epidemic leads to a curve that
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level for the disease, then the disease can no longer persist in the population and its transmission dies out. Thus, a disease can be eliminated from a population if enough individuals are immune due to either vaccination or recovery from prior exposure to disease. For example,
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due to the presence of the vaccinated group. For a disease that leads to greater clinical severity in older populations, the unvaccinated proportion of the population may experience the disease relatively later in life than would occur in the absence of vaccine.
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Interruption of endemic transmission of an infectious disease, which occurs if each infected individual infects less than one other, is achieved by maintaining vaccination coverage to keep the proportion of immune individuals above the critical immunization
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is the compartment used for the individuals of the population who have been infected and then removed from the disease, either due to immunization or due to death. Those in this category are not able to be infected again or to transmit the infection to
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Models are only as good as the assumptions on which they are based. If a model makes predictions that are out of line with observed results and the mathematics is correct, the initial assumptions must change to make the model useful.
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Homogeneous mixing of the population, i.e., individuals of the population under scrutiny assort and make contact at random and do not mix mostly in a smaller subgroup. This assumption is rarely justified because
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The modelling of infectious diseases is a tool that has been used to study the mechanisms by which diseases spread, to predict the future course of an outbreak and to evaluate strategies to control an epidemic.
516: 2955: 2105: 736:, the higher the basic reproduction number, the lower the proportion of the population susceptible must be, and vice versa. This expression has limitations concerning the susceptibility proportion, e.g. the 174:) there is the same number of people in the population. This is often well-justified for developed countries where there is a low infant mortality and much of the population lives to the life expectancy. 218:
A common explanation for the growth of epidemics holds that 1 person infects 2, those 2 infect 4 and so on and so on with the number of infected doubling every generation. It is analogous to a game of
2100: 408:. It is, however, not always straightforward to find the transmission network out of the contact network and the disease dynamics. For example, if a contact network can be approximated with an 1034:. A classic compartmental model in epidemiology is the SIR model, which may be used as a simple model for modelling epidemics. Multiple other types of compartmental models are also employed. 4564:
Costris-Vas C, Schwartz EJ, Smith? RJ (November 2020). "Predicting COVID-19 using past pandemics as a guide: how reliable were mathematical models then, and how reliable will they be now?".
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Models have the advantage of examining multiple outcomes simultaneously, rather than making a single forecast. Models have shown broad degrees of reliability in past pandemics, such as
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individuals in a population. The Kermack–McKendrick epidemic model was successful in predicting the behavior of outbreaks very similar to that observed in many recorded epidemics.
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epidemic process is deterministic. In other words, the changes in population of a compartment can be calculated using only the history that was used to develop the model.
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Assume the rectangular stationary age distribution and let also the ages of infection have the same distribution for each birth year. Let the average age of infection be
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denotes the individuals of the population who have been infected with the disease and are capable of spreading the disease to those in the susceptible category.
2255:). It is the minimum proportion of the population that must be immunized at birth (or close to birth) in order for the infection to die out in the population. 1938:{\displaystyle R_{0}={\frac {N}{S}}={\frac {\mu N\operatorname {E} (T_{L})}{\mu N\operatorname {E} }}={\frac {\operatorname {E} (T_{L})}{\operatorname {E} }},} 7728: 6769: 6764: 5712: 4829: 804:
is the age at which in this model every individual is assumed to die. But the mathematical definition of the endemic steady state can be rearranged to give:
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Blower S, Bernoulli D (2004). "An attempt at a new analysis of the mortality caused by smallpox and of the advantages of inoculation to prevent it".
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In 1927, W. O. Kermack and A. G. McKendrick created a model in which they considered a fixed population with only three compartments: susceptible,
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when it can be sustained in a population without the need for external inputs. This means that, on average, each infected person is infecting
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are immune (or infectious). Then it can be shown by an easy argument that the proportion of the population that is susceptible is given by:
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is used to represent the individuals not yet infected with the disease at time t, or those susceptible to the disease of the population.
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programs. The modelling can help decide which intervention(s) to avoid and which to trial, or can predict future growth patterns, etc.
7608: 6950: 6920: 6553: 6485: 7020: 5915: 5910: 145:. For example, epidemiological ABMs have been used to inform public health (nonpharmaceutical) interventions against the spread of 2227:{\displaystyle {\begin{aligned}&R_{0}\cdot (1-q)=1,\\&1-q={\frac {1}{R_{0}}},\\&q=1-{\frac {1}{R_{0}}}.\end{aligned}}} 7587: 6562: 5994: 5401: 5017: 725:) of the disease, assuming everyone is susceptible, multiplied by the proportion of the population that is actually susceptible ( 7171: 7820: 7681: 7208: 7176: 7005: 6955: 5588: 1677:, with the last wild case in 1977, and certification of the eradication of indigenous transmission of 2 of the 3 types of wild 7266: 6876: 6329: 5927: 5646: 5624: 4260: 3111:
Thus, the vaccination program may raise the average age of infection, and unvaccinated individuals will experience a reduced
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If the vaccine used is insufficiently effective or the required coverage cannot be reached, the program may fail to exceed
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Remember that this is the threshold level. Die out of transmission will only occur if the proportion of immune individuals
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for various infectious diseases and use those parameters to calculate the effects of different interventions, like mass
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and plant health interventions. Models use basic assumptions or collected statistics along with mathematics to find
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network is a locally tree-like network, meaning that any local neighborhood in such a network takes the form of a
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This change occurs simply because there are now fewer susceptibles in the population who can be infected.
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from 26 years 7 months to 29 years 9 months. Daniel Bernoulli's work preceded the modern understanding of
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must equal one (since in this simplified model, everyone is either susceptible or immune). Then:
638:= 1, then each person will infect on average exactly one other person, so the disease will become 7887: 7784: 7774: 7452: 7286: 7027: 6993: 6978: 6854: 6824: 6744: 6662: 6232: 6227: 6136: 6116: 5750: 5593: 5558: 5412: 5378: 4928: 4760: 4334: 4242: 4206: 4175: 4147: 4072: 3968: 3820: 3643: 3594: 3535: 3357: 3314: 3220: 3112: 1566: 950: 659: 224: 163: 131: 112: 30: 2067: 4517:"FBA reveals guanylate kinase as a potential target for antiviral therapies against SARS-CoV-2" 3375: 7799: 7779: 7759: 7575: 7542: 7521: 7375: 7216: 7106: 7000: 6861: 6686: 6649: 6539: 6518: 6459: 6319: 6272: 6074: 5576: 5245: 5235: 5225: 5027: 5010: 4801:: Open source framework for Epidemiological Modeling available through the Eclipse Foundation. 4739: 4696: 4583: 4546: 4497: 4448: 4391: 4342: 4234: 4116: 4098: 4025: 3929: 3911: 3864: 3846: 3733: 3692: 3635: 3586: 3527: 3478: 3349: 3143:
Elimination everywhere at the same time such that the infectious agent dies out (for example,
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minus those that would normally be infected but that cannot be now since they are immune.
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equals 0.5 implicates S has to be 2, however this proportion exceeds the population size.
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Squazzoni F, Polhill JG, Edmonds B, Ahrweiler P, Antosz P, Scholz G, et al. (2020).
4426: 4320: 4220: 4161: 4086: 4003: 3899: 3834: 3513: 3456: 3302: 7902: 7866: 7713: 7643: 7370: 7261: 7221: 7101: 6927: 6866: 6411: 6344: 6287: 6059: 5948: 5940: 5818: 5813: 5760: 5484: 5265: 5260: 5220: 5169: 5134: 4972: 4908: 4734: 4709: 4691: 4666: 4541: 4492: 4467: 4443: 4410: 4386: 4361: 4111: 4060: 4020: 3987: 3924: 3883: 3859: 3808: 3687: 3662: 3473: 3440: 3245: 1554: 1550: 3555:"Computational Models That Matter During a Global Pandemic Outbreak: A Call to Action" 416:, and the disease spreading parameters are as defined in the example above, such that 7927: 7861: 7769: 7526: 7511: 7481: 7476: 7331: 7094: 7089: 7084: 7079: 6988: 6834: 6633: 6292: 6249: 6208: 6101: 6084: 6042: 5755: 5306: 5275: 5119: 4896: 4532: 4246: 3647: 3598: 3539: 3464: 2424:{\displaystyle \lim _{t\to \infty }S(t)=e^{-\int _{0}^{\infty }\lambda (t)\,dt}=1-p.} 1669: 1623: 1600: 1031: 228: 46: 17: 4179: 3318: 3101:{\displaystyle A_{q}={\frac {L}{(L/A)(1-q)}}={\frac {AL}{L(1-q)}}={\frac {A}{1-q}}.} 2071:
Graph of herd immunity threshold vs basic reproduction number with selected diseases
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is the transmission rate per person and the disease has a mean infectious period of
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of contact between people. Such a network can be represented mathematically with a
4808: 929:{\displaystyle {\frac {1}{R_{0}}}={\frac {A}{L}}\Rightarrow R_{0}={\frac {L}{A}}.} 4516: 3405: 7390: 7380: 7241: 7047: 7042: 6960: 6935: 6903: 6829: 6691: 6582: 6574: 6396: 6198: 6121: 6096: 5845: 5825: 5730: 5690: 5528: 4985: 4901: 4884: 4795:: Enables simulation of emerging infectious diseases spreading across the world. 4229: 4194: 3240: 2688: 108: 101: 74: 54: 4483: 4094: 3522: 3497: 7516: 7491: 7181: 7131: 6334: 6309: 6277: 6054: 6035: 6025: 6013: 5860: 5472: 5444: 5270: 5230: 5102: 4789:: Interactive (GUI-based) software to build, simulate, and analyze ODE models. 4377: 4170: 4135: 3310: 3165: 3148: 1678: 219: 4102: 3915: 3850: 3590: 3554: 7565: 7136: 7009: 6578: 6406: 5885: 5210: 4918: 4913: 4846: 4811:: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena 4434: 4011: 3728: 3711: 3613: 3169: 1657: 1591: 1178: 50: 4700: 4587: 4550: 4501: 4452: 4395: 4238: 4134:
Pastor-Satorras R, Castellano C, Van Mieghem P, Vespignani A (2015-08-31).
4120: 4029: 3933: 3868: 3737: 3696: 3639: 3531: 3482: 3353: 328:{\displaystyle R_{0}={\frac {\langle k^{2}\rangle }{\langle k\rangle }}-1,} 227:
until it crashes to zero as all the population have been infected. i.e. no
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An introductory book on infectious disease modelling and its applications.
4346: 3712:"Mathematical modelling and prediction in infectious disease epidemiology" 3498:"Special report: The simulations driving the world's response to COVID-19" 3441:"Spatial pattern formation facilitates eradication of infectious diseases" 666:, any less and the disease will die out). In mathematical terms, that is: 7407: 7400: 7395: 7365: 7121: 7057: 7052: 6389: 6304: 5880: 5865: 5855: 5808: 5353: 5149: 5129: 4923: 4866: 3235: 3144: 2541:{\displaystyle p=1-e^{-\int _{0}^{\infty }\beta I(t)\,dt}=1-e^{-R_{0}p}.} 1609: 1558: 663: 93: 38: 4786: 4682: 4578: 3907: 3771: 3571: 1285:. The animation shows the effect of reducing the rate of infection from 7666: 7126: 6888: 6570: 6193: 6064: 5317: 4874: 4725: 4329: 4304: 3972: 3948: 3581: 1042: 27:
Using mathematical models to understand infectious disease transmission
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it will move throughout the population but not increase or decrease.
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Nakamura GM, Monteiro AC, Cardoso GC, Martinez AS (February 2017).
511:{\displaystyle R_{0}={\dfrac {\beta }{\gamma }}{\langle k\rangle }} 79:
Natural and Political Observations made upon the Bills of Mortality
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one other person (any more and the number of people infected will
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mixing is a standard assumption to make the mathematics tractable.
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This allows for the basic reproduction number of a disease given
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and animals, including humans, are concerned with this problem.
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If the proportion of the population that is immune exceeds the
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Mathematical models need to integrate the increasing volume of
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Hethcote HW (2000). "The mathematics of infectious diseases".
257:, then the basic reproduction can be written in terms of the 4753:
Mathematical Structures of Epidemic Systems. Second Printing
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Journal of the Royal Statistical Society. Series A (General)
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K Rizi A, Faqeeh A, Badie-Modiri A, Kivelä M (2022-04-20).
4276:"Data over Space and Time; Lecture 21: Compartment Models" 3426:
Mathematical Models in Population Biology and Epidemiology
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Because the fraction of the final size of the population
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The 1920s saw the emergence of compartmental models. The
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The first scientist who systematically tried to quantify
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is the proportion of the population that is immune and
1541:), and where infants can be born with immunity (MSIR). 365:
is the mean-degree (average degree) of the network and
4362:"Mathematical epidemiology: Past, present, and future" 3882:
Nakamura GM, Cardoso GC, Martinez AS (February 2020).
2816:. Assuming that life expectancy has not changed, now: 1317: 1291: 1265: 1188: 1155: 1129: 1052: 3559:
Journal of Artificial Societies and Social Simulation
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When mass vaccination cannot exceed the herd immunity
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This provides a simple way to estimate the parameter
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Epidemics can be modeled as diseases spreading over
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and no peak and gradual decline as seen in reality.
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Modeling Infectious Diseases: In Humans and Animals
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Many theoretical studies of the 141:(ABMs) have been used in exchange for simpler 126:(1928) both describe the relationship between 107:In the early 20th century, William Hamer and 7682: 6547: 4830: 4600:: CS1 maint: DOI inactive as of April 2024 ( 2640:{\displaystyle R_{0}={\frac {-\ln(1-p)}{p}}.} 1046:Diagram of the SIR model with initial values 750:, for instance when individuals younger than 8: 4632:Computational Modeling of Infectious Disease 2665:Suppose that a proportion of the population 574: 568: 554: 548: 539: 526: 504: 498: 386: 373: 351: 345: 310: 304: 299: 286: 2307:{\displaystyle q_{c}=1-{\frac {1}{R_{0}}}.} 1016:in either type of population distribution. 7689: 7675: 7667: 6799: 6554: 6540: 6532: 6003: 5457: 5331: 5288: 5193: 4862: 4837: 4823: 4815: 3667:Journal of Evaluation in Clinical Practice 2798:in those who have been left unvaccinated. 2321:that is never infected can be defined as: 37:progress to show the likely outcome of an 4733: 4690: 4577: 4540: 4491: 4442: 4385: 4328: 4228: 4210: 4169: 4151: 4110: 4076: 4045:Network Science by Albert-László Barabási 4019: 3923: 3858: 3824: 3770: 3760: 3727: 3686: 3629: 3580: 3570: 3521: 3472: 3077: 3042: 3010: 2998: 2989: 2983: 2920: 2910: 2899: 2890: 2881: 2875: 2862:{\displaystyle R_{q}={\frac {L}{A_{q}}},} 2848: 2839: 2830: 2824: 2732: 2719: 2713: 2601: 2592: 2586: 2562: 2556: 2524: 2516: 2494: 2473: 2468: 2460: 2442: 2397: 2379: 2374: 2366: 2335: 2329: 2293: 2284: 2269: 2263: 2209: 2200: 2172: 2163: 2113: 2104: 2102: 2036: 2023: 2002: 1987: 1976: 1961: 1958: 1956: 1917: 1904: 1874: 1858: 1840: 1827: 1791: 1769: 1756: 1747: 1741: 1702: 1696: 1502: 1471: 1440: 1408: 1379: 1350: 1316: 1290: 1264: 1187: 1154: 1128: 1051: 982: 967: 961: 913: 904: 887: 876: 867: 865: 829: 820: 812: 774: 766: 683: 674: 567: 558: 547: 533: 525: 523: 497: 485: 476: 470: 443: 441: 421: 380: 372: 370: 344: 342: 293: 283: 274: 268: 4635:. Cambridge, MA: Elsevier/Academic Press 4624:. Princeton: Princeton University Press. 4566:Mathematical Biosciences and Engineering 4136:"Epidemic processes in complex networks" 1684:The herd immunity level will be denoted 465:, then the basic reproduction number is 5911:Ear-Nose-Throat/Upper respiratory tract 5084:Access to water, sanitation and hygiene 4515:Renz A, Widerspick L, Dräger A (2020). 3278:. New York: Cambridge University Press. 3263: 1030:Compartmental models are formulated as 998:{\displaystyle R_{0}=1+{\frac {L}{A}}.} 393:{\displaystyle {\langle k^{2}\rangle }} 261:of the transmission network such that: 170:and then dies, and for each age (up to 7857:Construction and management simulation 6494:Infectious disease (medical specialty) 6386:Antimicrobial resistance surveillance 4758: 4593: 3789: 3778: 4409:Britton T, Ball F, Trapman P (2020). 4059:Kenah E, Robins JM (September 2007). 3612:Sridhar D, Majumder MS (April 2020). 3269: 3267: 1620:persistence of pathogens within hosts 843:{\displaystyle S={\frac {1}{R_{0}}}.} 754:are susceptible and those older than 458:{\displaystyle {\dfrac {1}{\gamma }}} 7: 7939:Mathematical and theoretical biology 7893:List of computer simulation software 5741:Compartmental models in epidemiology 3439:Eisinger D, Thulke HH (April 2008). 3424:Brauer F, Castillo-Chávez C (2001). 3419: 3417: 3196:Compartmental models in epidemiology 1026:Compartmental models in epidemiology 1020:Compartmental models in epidemiology 650:An infectious disease is said to be 3716:Clinical Microbiology and Infection 2791:will also change to some new value 1688:. Recall that, for a stable state: 1252:{\textstyle S(0)=997,I(0)=3,R(0)=0} 1116:{\textstyle S(0)=997,I(0)=3,R(0)=0} 358:{\displaystyle {\langle k\rangle }} 7609:Eradication of infectious diseases 7366:Androvax (androstenedione albumin) 4708:Boily MC, Mâsse B (Jul–Aug 1997). 4665:Grassly NC, Fraser C (June 2008). 4303:Kermack WO, McKendrick AG (1991). 4274:Cosma Shalizi (15 November 2018). 3661:Maziarz M, Zach M (October 2020). 3276:Epidemic Modeling: An Introduction 2474: 2380: 2342: 1988: 1962: 1885: 1861: 1808: 1778: 617:, die out, or remain constant: if 25: 7199:Respiratory syncytial virus (RSV) 4714:Canadian Journal of Public Health 3949:"Epidemics and Rumours: A Survey" 1654:, spread and control of infection 790:{\displaystyle S={\frac {A}{L}}.} 120:Kermack–McKendrick epidemic model 7588:Alternative vaccination schedule 6563:Artificial induction of immunity 6490:Economics of Infectious Diseases 4309:Bulletin of Mathematical Biology 3465:10.1111/j.1365-2664.2007.01439.x 2801:Recall the relation that linked 2756:{\displaystyle R_{q}=R_{0}(1-q)} 7821:Integrated assessment modelling 2787:, the average age of infection 2783:As a consequence of this lower 2246:critical immunization threshold 1723:{\displaystyle R_{0}\cdot S=1.} 1664:Mathematics of mass vaccination 115:to explain epidemic behaviour. 7420:Ovandrotone albumin (Fecundin) 6499:Infectious disease informatics 6330:Transmission-based precautions 4533:10.1093/bioinformatics/btaa813 4466:Pollard AJ, Bijker EM (2021). 3986:Maier BF, Brockmann D (2020). 3445:The Journal of Applied Ecology 3068: 3056: 3033: 3021: 3018: 3004: 2938: 2926: 2750: 2738: 2625: 2613: 2491: 2485: 2394: 2388: 2356: 2350: 2339: 2134: 2122: 2008: 1995: 1982: 1969: 1926: 1923: 1897: 1891: 1880: 1867: 1849: 1846: 1820: 1814: 1797: 1784: 1513: 1507: 1482: 1476: 1451: 1445: 1419: 1413: 1390: 1384: 1361: 1355: 1240: 1234: 1219: 1213: 1198: 1192: 1104: 1098: 1083: 1077: 1062: 1056: 897: 414:Poissonian degree distribution 1: 6956:Group B streptococcal disease 6775:Vaccines for Children Program 5916:Chest/Lower respiratory tract 5691:Ocular (Eye) mucosal membrane 5052:Behavioral/lifestyle factors 4755:. Heidelberg, 2008: Springer. 3710:Huppert A, Katriel G (2013). 1565:, structure and evolution of 946:using easily available data. 704:{\displaystyle \ R_{0}S\ =1.} 7790:Hydrological transport model 7744:Protein structure prediction 7739:Modelling biological systems 5478:Aerosol-generating procedure 5256:Silent/Subclinical infection 4956:Multidrug-resistant bacteria 4671:Nature Reviews. Microbiology 4366:Infectious Disease Modelling 2244:We have just calculated the 1634:role of host genetic factors 951:exponential age distribution 588:for a Poisson distribution. 404:of the transmission network 7734:Metabolic network modelling 6142:Vaccine-preventable disease 6090:Monoclonal antibody therapy 4527:(Supplement_2): i813–i821. 4230:10.1103/PhysRevE.105.044313 3334:Reviews in Medical Virology 1628:role and identification of 1545:Infectious disease dynamics 235:Epidemic Models on Networks 162:Rectangular and stationary 7965: 7847:Business process modelling 6283:Respiratory source control 4484:10.1038/s41577-020-00479-7 4283:Carnegie Mellon University 4095:10.1103/PhysRevE.76.036113 3888:Royal Society Open Science 3523:10.1038/d41586-020-01003-6 1648:structure and interactions 1532:Other compartmental models 1123:, and rates for infection 1023: 595: 7719:Chemical process modeling 7627: 6427:Global Health Initiatives 6417:Evolutionary epidemiology 6112:Post-exposure prophylaxis 6048:Antimicrobial stewardship 5771:Multiplicity of infection 5736:Basic reproduction number 5512:Percutaneous inoculation 4996:Host–pathogen interaction 4472:Nature Reviews Immunology 4378:10.1016/j.idm.2017.02.001 4171:10.1103/RevModPhys.87.925 4140:Reviews of Modern Physics 3407:The Prevention of Malaria 3311:10.1137/S0036144500371907 3274:Daley DJ, Gani J (2005). 3191:Basic reproduction number 2785:basic reproduction number 1576:Research topics include: 1278:{\textstyle \gamma =0.04} 1168:{\textstyle \gamma =0.04} 949:For a population with an 716:basic reproduction number 604:basic reproduction number 598:Basic reproduction number 124:Reed–Frost epidemic model 7765:Chemical transport model 7729:Infectious disease model 6951:Clostridioides difficile 6245:Protective sequestration 6107:Pre-exposure prophylaxis 5398:Generational difference 4951:Horizontal gene transfer 4941:Antimicrobial resistance 4765:: CS1 maint: location ( 3614:"Modelling the pandemic" 3391:Epidemiology Old and New 1948:which is approximately: 1330:{\textstyle \beta =0.12} 188:Types of epidemic models 84:The earliest account of 7209:Tick-borne encephalitis 6432:Microbial phylogenetics 6350:Wastewater surveillance 5871:Geographic distribution 5746:Critical community size 5544:Surgical site infection 5392:Iatrogenic/Medical care 5311:Microbial translocation 5307:Endogenous reactivation 5302:Normal flora overgrowth 5251:Opportunistic infection 5023:Opportunistic infection 4582:(inactive 2024-04-24). 4435:10.1126/science.abc6810 4012:10.1126/science.abb4557 3729:10.1111/1469-0691.12308 3206:Critical community size 2687: > 1. The 2078:will be (1 −  1304:{\textstyle \beta =0.5} 1259:, and rate of recovery 1142:{\textstyle \beta =0.4} 7619:List of vaccine topics 6619:Mathematical modelling 6504:Microbial bioterrorism 6127:efficacy/effectiveness 5535:Surgical intervention 5427:Breakthrough infection 5049:Genetic predisposition 5033:Susceptible individual 4880:Germ theory of disease 4647:Vynnycky E, White RG. 3788:Cite journal requires 3231:Next-generation matrix 3226:Landscape epidemiology 3102: 2951: 2863: 2757: 2641: 2572: 2542: 2425: 2308: 2228: 2072: 2058: 1939: 1724: 1520: 1489: 1458: 1426: 1397: 1368: 1342: 1331: 1305: 1279: 1253: 1175: 1169: 1143: 1117: 999: 930: 853:Therefore, due to the 844: 791: 705: 660:grow sub-exponentially 582: 512: 459: 430: 429:{\displaystyle \beta } 394: 359: 329: 214:Sub-exponential growth 86:mathematical modelling 7898:Mathematical modeling 7842:Biopsychosocial model 7614:Vaccinate Your Family 7065:Japanese encephalitis 6340:Universal precautions 5298:Endogenous overgrowth 5150:Poultry and livestock 4620:Keeling M, Rohani P. 3496:Adam D (April 2020). 3428:. New York: Springer. 3393:. London: Kegan Paul. 3103: 2952: 2864: 2758: 2642: 2573: 2571:{\displaystyle R_{0}} 2543: 2426: 2309: 2229: 2070: 2059: 1940: 1725: 1521: 1490: 1459: 1427: 1398: 1369: 1332: 1306: 1280: 1254: 1181: 1170: 1144: 1118: 1045: 1000: 931: 845: 792: 706: 662:and there will be an 583: 513: 460: 431: 395: 360: 330: 259:average excess degree 18:Epidemiological model 7852:Catastrophe modeling 7698:Scientific modelling 7497:John Franklin Enders 6442:Genomic reassortment 6422:Genetic epidemiology 6261:Health communication 6189:Flattening the curve 6179:Disease surveillance 5962:Systemic/Generalized 5726:Animal disease model 5206:Asymptomatic carrier 3211:Disease surveillance 2982: 2874: 2823: 2712: 2585: 2555: 2441: 2328: 2262: 2101: 1955: 1740: 1695: 1675:smallpox eradication 1638:spatial epidemiology 1630:infection reservoirs 1519:{\displaystyle R(t)} 1501: 1488:{\displaystyle I(t)} 1470: 1457:{\displaystyle S(t)} 1439: 1425:{\displaystyle R(t)} 1407: 1396:{\displaystyle I(t)} 1378: 1367:{\displaystyle S(t)} 1349: 1339:flattening the curve 1315: 1289: 1263: 1186: 1153: 1127: 1050: 960: 864: 811: 765: 673: 646:Endemic steady state 522: 469: 440: 420: 369: 341: 267: 143:compartmental models 7795:Modular Ocean Model 6683:Virus-like particle 6607:Vaccine ingredients 6509:Pandemic prevention 6465:Viral phylodynamics 6446:Re-emerging disease 6335:Travel restrictions 5539:Postoperative wound 5508:Blood-borne disease 5490:Respiratory droplet 5402:Vertical/Congenital 5387:Nosocomial/Hospital 5344:Spillover infection 4683:10.1038/nrmicro1845 4579:10.3934/mbe.2020383 4427:2020Sci...369..846B 4321:1927RSPSA.115..700K 4221:2022PhRvE.105d4313R 4162:2015RvMP...87..925P 4087:2007PhRvE..76c6113K 4004:2020Sci...368..742M 3908:10.1098/rsos.191504 3900:2020RSOS....791504N 3835:2017NatSR...740885N 3572:10.18564/jasss.4298 3514:2020Natur.580..316A 3457:2008JApEc..45..415E 3303:2000SIAMR..42..599H 2478: 2384: 1616:population genetics 1606:intra-host dynamics 1567:infectious diseases 1563:population dynamics 1553:being generated on 855:transitive property 592:Reproduction number 406:degree distribution 225:grows exponentially 35:infectious diseases 31:Mathematical models 7949:Medical statistics 7888:Data visualization 7872:Input–output model 7785:Hydrological model 7775:Geologic modelling 7654:Never to phase III 7453:Hexavalent vaccine 7267:Epstein–Barr virus 7162:Oxford–AstraZeneca 6855:NmVac4-A/C/Y/W-135 6455:Selection pressure 5751:Force of infection 5379:Contagious disease 5314:Endogenous seeding 5211:Chain of infection 5135:Injection drug use 5046:Vaccination status 4929:Case fatality rate 4847:infectious disease 4793:GLEaMviz Simulator 4726:10.1007/BF03404793 4330:10.1007/BF02464423 4071:(3 Pt 2): 036113. 3813:Scientific Reports 3221:Force of infection 3113:force of infection 3098: 2947: 2859: 2753: 2691:programme changes 2637: 2568: 2538: 2464: 2421: 2370: 2346: 2304: 2224: 2222: 2073: 2054: 1935: 1720: 1516: 1485: 1454: 1422: 1393: 1364: 1343: 1327: 1301: 1275: 1249: 1176: 1165: 1139: 1113: 995: 926: 840: 800:We reiterate that 787: 701: 578: 508: 495: 455: 453: 426: 390: 355: 325: 139:agent-based models 113:law of mass action 45:) and help inform 7921: 7920: 7800:Wildfire modeling 7780:Groundwater model 7760:Atmospheric model 7664: 7663: 7576:Vaccines and SIDS 7463: 7462: 7237:Hepatitis A and B 7213:Varicella zoster 6675:Subunit/component 6529: 6528: 6519:Tropical medicine 6460:Synthetic biology 6361: 6360: 6320:Social distancing 6273:Outbreak response 5894: 5893: 5721:Agent-based model 5707: 5706: 5703: 5702: 5699: 5698: 5246:Natural reservoir 5236:Infectious period 5226:Incubation period 5183: 5182: 5139:Natural disaster 5108:Tropical diseases 5091:Biodiversity loss 5028:Risk of infection 5018:Microbiome health 5011:Immunosuppression 4629:von Csefalvay C. 4421:(6505): 846–849. 4360:Brauer F (2017). 4199:Physical Review E 4065:Physical Review E 3998:(6492): 742–746. 3843:10.1038/srep40885 3762:10.3390/g11040051 3755:. Games Journal. 3679:10.1111/jep.13459 3631:10.1136/bmj.m1567 3508:(7803): 316–318. 3093: 3072: 3037: 2942: 2905: 2854: 2632: 2331: 2299: 2215: 2178: 2049: 2031: 2012: 1930: 1853: 1764: 1403:; and recovered, 1149:and for recovery 990: 921: 895: 882: 835: 782: 694: 678: 615:sub-exponentially 494: 452: 410:Erdős–Rényi graph 314: 16:(Redirected from 7956: 7913:Visual analytics 7908:Systems thinking 7826:Population model 7691: 7684: 7677: 7668: 7555:MMR autism fraud 7502:Maurice Hilleman 7487:Hilary Koprowski 6800: 6556: 6549: 6542: 6533: 6514:Tropical disease 6450:Reverse zoonosis 6437:One Health Model 6266:Health education 6255:Community health 6174:Cordon sanitaire 6147:Ring vaccination 6117:Repurposed drugs 6004: 5923:Gastrointestinal 5766:Machine learning 5570:Gastrointestinal 5521:Intravenous line 5458: 5372:/Cross-infection 5359:Reverse zoonosis 5332: 5289: 5194: 5175:War and conflict 5043:Nutrition status 5006:Immunodeficiency 4863: 4839: 4832: 4825: 4816: 4770: 4764: 4756: 4747: 4737: 4704: 4694: 4660: 4658: 4657: 4643: 4641: 4640: 4625: 4606: 4605: 4599: 4591: 4581: 4572:(6): 7502–7518. 4561: 4555: 4554: 4544: 4512: 4506: 4505: 4495: 4463: 4457: 4456: 4446: 4406: 4400: 4399: 4389: 4357: 4351: 4350: 4332: 4300: 4294: 4293: 4291: 4289: 4280: 4271: 4265: 4264: 4257: 4251: 4250: 4232: 4214: 4190: 4184: 4183: 4173: 4155: 4131: 4125: 4124: 4114: 4080: 4056: 4050: 4049: 4040: 4034: 4033: 4023: 3983: 3977: 3976: 3947:Dietz K (1967). 3944: 3938: 3937: 3927: 3879: 3873: 3872: 3862: 3828: 3804: 3798: 3797: 3791: 3786: 3784: 3776: 3774: 3764: 3748: 3742: 3741: 3731: 3722:(11): 999–1005. 3707: 3701: 3700: 3690: 3673:(5): 1352–1360. 3658: 3652: 3651: 3633: 3609: 3603: 3602: 3584: 3574: 3550: 3544: 3543: 3525: 3493: 3487: 3486: 3476: 3436: 3430: 3429: 3421: 3412: 3411: 3401: 3395: 3394: 3389:Hamer W (1928). 3386: 3380: 3379: 3372: 3366: 3365: 3329: 3323: 3322: 3286: 3280: 3279: 3271: 3107: 3105: 3104: 3099: 3094: 3092: 3078: 3073: 3071: 3051: 3043: 3038: 3036: 3014: 2999: 2994: 2993: 2956: 2954: 2953: 2948: 2943: 2941: 2925: 2924: 2911: 2906: 2904: 2903: 2891: 2886: 2885: 2868: 2866: 2865: 2860: 2855: 2853: 2852: 2840: 2835: 2834: 2762: 2760: 2759: 2754: 2737: 2736: 2724: 2723: 2646: 2644: 2643: 2638: 2633: 2628: 2602: 2597: 2596: 2577: 2575: 2574: 2569: 2567: 2566: 2547: 2545: 2544: 2539: 2534: 2533: 2529: 2528: 2502: 2501: 2477: 2472: 2430: 2428: 2427: 2422: 2405: 2404: 2383: 2378: 2345: 2313: 2311: 2310: 2305: 2300: 2298: 2297: 2285: 2274: 2273: 2233: 2231: 2230: 2225: 2223: 2216: 2214: 2213: 2201: 2186: 2179: 2177: 2176: 2164: 2149: 2118: 2117: 2107: 2063: 2061: 2060: 2055: 2050: 2045: 2037: 2032: 2024: 2013: 2011: 2007: 2006: 1991: 1985: 1981: 1980: 1965: 1959: 1944: 1942: 1941: 1936: 1931: 1929: 1922: 1921: 1909: 1908: 1883: 1879: 1878: 1859: 1854: 1852: 1845: 1844: 1832: 1831: 1800: 1796: 1795: 1770: 1765: 1757: 1752: 1751: 1729: 1727: 1726: 1721: 1707: 1706: 1646:Strain (biology) 1525: 1523: 1522: 1517: 1494: 1492: 1491: 1486: 1463: 1461: 1460: 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7644:Clinical trials 7623: 7592: 7531: 7507:Stanley Plotkin 7469: 7459: 7371:Cancer vaccines 7354: 7348:Schistosomiasis 7326: 7320:Trypanosomiasis 7293: 7257:Cytomegalovirus 7167:Pfizer–BioNTech 6967: 6791: 6740:Vaccine wastage 6710: 6638: 6590: 6560: 6530: 6525: 6469: 6382:Antigenic shift 6377:Antigenic drift 6368: 6357: 6221:Barrier nursing 6169:Contact tracing 6160: 6153: 5998: 5996: 5989: 5900: 5890: 5791: 5785: 5776:Serial interval 5695: 5679: 5670:Cervico-vaginal 5665: 5656:Trans-placental 5651: 5635: 5603: 5565: 5501:Vascular system 5500: 5494: 5449: 5437: 5431: 5371: 5363: 5323: 5280: 5198: 5179: 5070: 5001:Immune response 4967: 4946:Drug resistance 4890:Infectious dose 4854: 4843: 4778: 4773: 4757: 4750: 4707: 4664: 4655: 4653: 4646: 4638: 4636: 4628: 4619: 4615: 4613:Further reading 4610: 4609: 4592: 4563: 4562: 4558: 4514: 4513: 4509: 4465: 4464: 4460: 4408: 4407: 4403: 4359: 4358: 4354: 4302: 4301: 4297: 4287: 4285: 4278: 4273: 4272: 4268: 4259: 4258: 4254: 4192: 4191: 4187: 4133: 4132: 4128: 4058: 4057: 4053: 4042: 4041: 4037: 3985: 3984: 3980: 3965:10.2307/2982521 3946: 3945: 3941: 3881: 3880: 3876: 3806: 3805: 3801: 3787: 3777: 3750: 3749: 3745: 3709: 3708: 3704: 3660: 3659: 3655: 3611: 3610: 3606: 3552: 3551: 3547: 3495: 3494: 3490: 3438: 3437: 3433: 3423: 3422: 3415: 3404:Ross R (1910). 3403: 3402: 3398: 3388: 3387: 3383: 3374: 3373: 3369: 3346:10.1002/rmv.443 3331: 3330: 3326: 3288: 3287: 3283: 3273: 3272: 3265: 3260: 3255: 3216:Ecosystem model 3201:Contact tracing 3186: 3158: 3122: 3082: 3052: 3044: 3003: 2985: 2980: 2979: 2966: 2916: 2915: 2895: 2877: 2872: 2871: 2844: 2826: 2821: 2820: 2807: 2796: 2779: 2771: 2728: 2715: 2710: 2709: 2703: 2697: 2686: 2678: 2660: 2653: 2603: 2588: 2583: 2582: 2558: 2553: 2552: 2520: 2512: 2456: 2439: 2438: 2362: 2326: 2325: 2289: 2265: 2260: 2259: 2253: 2221: 2220: 2205: 2184: 2183: 2168: 2147: 2146: 2109: 2099: 2098: 2038: 1998: 1986: 1972: 1960: 1953: 1952: 1913: 1900: 1884: 1870: 1860: 1836: 1823: 1801: 1787: 1771: 1743: 1738: 1737: 1698: 1693: 1692: 1666: 1586:epidemiological 1581:antigenic shift 1547: 1534: 1499: 1498: 1468: 1467: 1437: 1436: 1405: 1404: 1376: 1375: 1347: 1346: 1313: 1312: 1287: 1286: 1261: 1260: 1184: 1183: 1151: 1150: 1125: 1124: 1048: 1047: 1040: 1028: 1022: 963: 958: 957: 945: 900: 872: 862: 861: 825: 809: 808: 763: 762: 742: 724: 679: 671: 670: 648: 637: 630: 623: 612: 600: 594: 546: 529: 520: 519: 472: 467: 466: 438: 437: 418: 417: 376: 367: 366: 339: 338: 303: 289: 285: 270: 265: 264: 237: 216: 203: 195: 190: 155: 130:, infected and 122:(1927) and the 98:life expectancy 71:causes of death 63: 28: 23: 22: 15: 12: 11: 5: 7962: 7960: 7952: 7951: 7946: 7941: 7936: 7926: 7925: 7919: 7918: 7916: 7915: 7910: 7905: 7903:Systems theory 7900: 7895: 7890: 7884: 7882: 7881:Related topics 7878: 7877: 7875: 7874: 7869: 7867:Economic model 7864: 7859: 7854: 7849: 7844: 7838: 7836: 7832: 7831: 7829: 7828: 7823: 7818: 7812: 7810: 7809:Sustainability 7806: 7805: 7803: 7802: 7797: 7792: 7787: 7782: 7777: 7772: 7767: 7762: 7756: 7754: 7750: 7749: 7747: 7746: 7741: 7736: 7731: 7726: 7721: 7716: 7714:Cellular model 7710: 7708: 7702: 7701: 7696: 7694: 7693: 7686: 7679: 7671: 7662: 7661: 7658: 7657: 7656: 7655: 7652: 7641: 7635: 7629: 7628: 7625: 7624: 7622: 7621: 7616: 7611: 7606: 7600: 7598: 7594: 7593: 7591: 7590: 7585: 7578: 7573: 7568: 7563: 7558: 7545: 7539: 7537: 7533: 7532: 7530: 7529: 7524: 7522:Katalin Karikó 7519: 7514: 7509: 7504: 7499: 7494: 7489: 7484: 7479: 7473: 7471: 7465: 7464: 7461: 7460: 7458: 7457: 7456: 7455: 7450: 7445: 7440: 7432: 7427: 7422: 7417: 7412: 7411: 7410: 7405: 7404: 7403: 7398: 7388: 7383: 7378: 7368: 7362: 7360: 7356: 7355: 7353: 7352: 7351: 7350: 7345: 7336: 7334: 7328: 7327: 7325: 7324: 7323: 7322: 7314: 7313: 7312: 7301: 7299: 7295: 7294: 7292: 7291: 7290: 7289: 7284: 7279: 7277:Herpes simplex 7274: 7269: 7264: 7259: 7251: 7250: 7249: 7244: 7239: 7231: 7226: 7225: 7224: 7219: 7211: 7206: 7201: 7196: 7195: 7194: 7189: 7184: 7179: 7177:Sinopharm BIBP 7174: 7169: 7164: 7159: 7154: 7149: 7144: 7139: 7134: 7129: 7127:Bharat Biotech 7124: 7114: 7109: 7104: 7099: 7098: 7097: 7092: 7082: 7077: 7072: 7067: 7062: 7061: 7060: 7055: 7045: 7040: 7035: 7030: 7025: 7024: 7023: 7018: 7013: 6998: 6997: 6996: 6986: 6981: 6975: 6973: 6969: 6968: 6966: 6965: 6964: 6963: 6958: 6953: 6945: 6944: 6943: 6938: 6930: 6925: 6924: 6923: 6918: 6908: 6907: 6906: 6896: 6891: 6886: 6885: 6884: 6879: 6869: 6864: 6859: 6858: 6857: 6852: 6842: 6837: 6832: 6827: 6822: 6817: 6812: 6806: 6804: 6797: 6793: 6792: 6790: 6789: 6788: 6787: 6782: 6777: 6772: 6767: 6759: 6758: 6757: 6755:Vaccine injury 6752: 6747: 6742: 6737: 6732: 6727: 6718: 6716: 6715:Administration 6712: 6711: 6709: 6708: 6703: 6698: 6689: 6672: 6671: 6670: 6665: 6657: 6652: 6646: 6644: 6640: 6639: 6637: 6636: 6631: 6626: 6621: 6616: 6615: 6614: 6604: 6598: 6596: 6592: 6591: 6561: 6559: 6558: 6551: 6544: 6536: 6527: 6526: 6524: 6523: 6522: 6521: 6511: 6506: 6501: 6496: 6491: 6488: 6483: 6477: 6475: 6471: 6470: 6468: 6467: 6462: 6457: 6452: 6447: 6444: 6439: 6434: 6429: 6424: 6419: 6414: 6412:Emergent virus 6409: 6404: 6399: 6394: 6393: 6392: 6384: 6379: 6373: 6371: 6363: 6362: 6359: 6358: 6356: 6355: 6352: 6347: 6345:Vector control 6342: 6337: 6332: 6327: 6322: 6317: 6312: 6307: 6302: 6301: 6300: 6295: 6290: 6288:N95 respirator 6280: 6275: 6270: 6269: 6268: 6263: 6258: 6247: 6242: 6241: 6240: 6230: 6225: 6224: 6223: 6213: 6212: 6211: 6206: 6201: 6191: 6186: 6181: 6176: 6171: 6165: 6163: 6161:pharmaceutical 6155: 6154: 6152: 6151: 6150: 6149: 6144: 6139: 6134: 6129: 6119: 6114: 6109: 6104: 6099: 6094: 6093: 6092: 6082: 6077: 6072: 6067: 6062: 6057: 6052: 6051: 6050: 6040: 6039: 6038: 6028: 6023: 6022: 6021: 6010: 6008: 6007:Pharmaceutical 6001: 5991: 5990: 5988: 5987: 5984: 5979: 5974: 5969: 5964: 5959: 5958:Cardiovascular 5956: 5951: 5946: 5943: 5938: 5937:Nervous system 5935: 5932: 5931: 5930: 5920: 5919: 5918: 5913: 5904: 5902: 5896: 5895: 5892: 5891: 5889: 5888: 5883: 5878: 5873: 5868: 5863: 5858: 5853: 5848: 5843: 5838: 5833: 5828: 5823: 5822: 5821: 5816: 5806: 5801: 5795: 5793: 5787: 5786: 5784: 5783: 5778: 5773: 5768: 5763: 5761:Infection rate 5758: 5753: 5748: 5743: 5738: 5733: 5728: 5723: 5717: 5715: 5709: 5708: 5705: 5704: 5701: 5700: 5697: 5696: 5694: 5693: 5687: 5685: 5681: 5680: 5678: 5677: 5673: 5671: 5667: 5666: 5664: 5663: 5659: 5657: 5653: 5652: 5650: 5649: 5643: 5641: 5637: 5636: 5634: 5633: 5627: 5622: 5617: 5611: 5609: 5605: 5604: 5602: 5601: 5596: 5591: 5586: 5585: 5584: 5573: 5571: 5567: 5566: 5564: 5563: 5562: 5561: 5556: 5548: 5547: 5546: 5541: 5533: 5532: 5531: 5526: 5523: 5518: 5516:Injection site 5510: 5504: 5502: 5496: 5495: 5493: 5492: 5487: 5485:Dental aerosol 5482: 5481: 5480: 5470: 5464: 5462: 5455: 5451: 5450: 5448: 5447: 5441: 5439: 5433: 5432: 5430: 5429: 5424: 5423: 5422: 5417: 5416: 5415: 5410: 5407: 5396: 5395: 5394: 5389: 5381: 5375: 5373: 5369:Human-to-human 5365: 5364: 5362: 5361: 5356: 5351: 5346: 5340: 5338: 5329: 5325: 5324: 5322: 5321: 5315: 5312: 5309: 5304: 5299: 5295: 5293: 5286: 5282: 5281: 5279: 5278: 5273: 5268: 5266:Super-spreader 5263: 5261:Superinfection 5258: 5253: 5248: 5243: 5238: 5233: 5228: 5223: 5218: 5213: 5208: 5202: 5200: 5191: 5185: 5184: 5181: 5180: 5178: 5177: 5172: 5170:Vector control 5167: 5162: 5157: 5152: 5147: 5146: 5145: 5137: 5132: 5127: 5122: 5117: 5112: 5111: 5110: 5105: 5099:Climate zones 5097: 5095:Climate change 5092: 5089: 5086: 5080: 5078: 5072: 5071: 5069: 5068: 5067: 5066: 5063: 5060: 5059: 5058: 5050: 5047: 5044: 5041: 5038: 5030: 5025: 5020: 5015: 5014: 5013: 5008: 4998: 4993: 4988: 4983: 4977: 4975: 4969: 4968: 4966: 4965: 4960: 4959: 4958: 4953: 4948: 4938: 4937: 4936: 4931: 4926: 4921: 4911: 4909:Quorum sensing 4906: 4905: 4904: 4894: 4893: 4892: 4882: 4877: 4871: 4869: 4860: 4856: 4855: 4844: 4842: 4841: 4834: 4827: 4819: 4813: 4812: 4802: 4796: 4790: 4783: 4782: 4777: 4776:External links 4774: 4772: 4771: 4748: 4705: 4662: 4644: 4626: 4616: 4614: 4611: 4608: 4607: 4556: 4521:Bioinformatics 4507: 4458: 4401: 4372:(2): 113–127. 4352: 4315:(1–2): 33–55. 4295: 4266: 4252: 4185: 4146:(3): 925–979. 4126: 4051: 4035: 3978: 3959:(4): 505–528. 3939: 3874: 3799: 3790:|journal= 3743: 3702: 3653: 3604: 3545: 3488: 3451:(2): 415–423. 3431: 3413: 3396: 3381: 3367: 3324: 3297:(4): 599–653. 3281: 3262: 3261: 3259: 3256: 3254: 3253: 3248: 3246:Sexual network 3243: 3238: 3233: 3228: 3223: 3218: 3213: 3208: 3203: 3198: 3193: 3187: 3185: 3182: 3157: 3154: 3153: 3152: 3141: 3138: 3134: 3121: 3118: 3109: 3108: 3097: 3091: 3088: 3085: 3081: 3076: 3070: 3067: 3064: 3061: 3058: 3055: 3050: 3047: 3041: 3035: 3032: 3029: 3026: 3023: 3020: 3017: 3013: 3009: 3006: 3002: 2997: 2992: 2988: 2964: 2958: 2957: 2946: 2940: 2937: 2934: 2931: 2928: 2923: 2919: 2914: 2909: 2902: 2898: 2894: 2889: 2884: 2880: 2869: 2858: 2851: 2847: 2843: 2838: 2833: 2829: 2805: 2794: 2777: 2769: 2764: 2763: 2752: 2749: 2746: 2743: 2740: 2735: 2731: 2727: 2722: 2718: 2701: 2695: 2684: 2676: 2658: 2652: 2649: 2648: 2647: 2636: 2631: 2627: 2624: 2621: 2618: 2615: 2612: 2609: 2606: 2600: 2595: 2591: 2565: 2561: 2549: 2548: 2537: 2532: 2527: 2523: 2519: 2515: 2511: 2508: 2505: 2500: 2497: 2493: 2490: 2487: 2484: 2481: 2476: 2471: 2467: 2463: 2459: 2455: 2452: 2449: 2446: 2432: 2431: 2420: 2417: 2414: 2411: 2408: 2403: 2400: 2396: 2393: 2390: 2387: 2382: 2377: 2373: 2369: 2365: 2361: 2358: 2355: 2352: 2349: 2344: 2341: 2338: 2334: 2315: 2314: 2303: 2296: 2292: 2288: 2283: 2280: 2277: 2272: 2268: 2251: 2235: 2234: 2219: 2212: 2208: 2204: 2199: 2196: 2193: 2190: 2187: 2185: 2182: 2175: 2171: 2167: 2162: 2159: 2156: 2153: 2150: 2148: 2145: 2142: 2139: 2136: 2133: 2130: 2127: 2124: 2121: 2116: 2112: 2108: 2106: 2065: 2064: 2053: 2048: 2044: 2041: 2035: 2030: 2027: 2022: 2019: 2016: 2010: 2005: 2001: 1997: 1994: 1990: 1984: 1979: 1975: 1971: 1968: 1964: 1946: 1945: 1934: 1928: 1925: 1920: 1916: 1912: 1907: 1903: 1899: 1896: 1893: 1890: 1887: 1882: 1877: 1873: 1869: 1866: 1863: 1857: 1851: 1848: 1843: 1839: 1835: 1830: 1826: 1822: 1819: 1816: 1813: 1810: 1807: 1804: 1799: 1794: 1790: 1786: 1783: 1780: 1777: 1774: 1768: 1763: 1760: 1755: 1750: 1746: 1731: 1730: 1719: 1716: 1713: 1710: 1705: 1701: 1665: 1662: 1661: 1660: 1655: 1649: 1643: 1640: 1635: 1632: 1626: 1621: 1618: 1612: 1607: 1604: 1598: 1594:and spread of 1589: 1583: 1546: 1543: 1533: 1530: 1529: 1528: 1515: 1512: 1509: 1506: 1496: 1484: 1481: 1478: 1475: 1465: 1453: 1450: 1447: 1444: 1421: 1418: 1415: 1412: 1392: 1389: 1386: 1383: 1363: 1360: 1357: 1354: 1326: 1323: 1320: 1300: 1297: 1294: 1274: 1271: 1268: 1248: 1245: 1242: 1239: 1236: 1233: 1230: 1227: 1224: 1221: 1218: 1215: 1212: 1209: 1206: 1203: 1200: 1197: 1194: 1191: 1164: 1161: 1158: 1138: 1135: 1132: 1112: 1109: 1106: 1103: 1100: 1097: 1094: 1091: 1088: 1085: 1082: 1079: 1076: 1073: 1070: 1067: 1064: 1061: 1058: 1055: 1039: 1036: 1024:Main article: 1021: 1018: 1006: 1005: 994: 989: 986: 981: 978: 975: 970: 966: 943: 937: 936: 925: 920: 917: 912: 907: 903: 899: 894: 891: 886: 879: 875: 871: 851: 850: 839: 832: 828: 824: 819: 816: 798: 797: 786: 781: 778: 773: 770: 740: 722: 712: 711: 700: 697: 691: 686: 682: 647: 644: 635: 628: 621: 610: 596:Main article: 593: 590: 576: 573: 570: 566: 561: 556: 553: 550: 545: 541: 536: 532: 528: 506: 503: 500: 493: 490: 484: 479: 475: 451: 448: 425: 400:is the second 388: 383: 379: 375: 353: 350: 347: 324: 321: 318: 312: 309: 306: 301: 296: 292: 288: 282: 277: 273: 236: 233: 215: 212: 202: 199: 194: 191: 189: 186: 185: 184: 175: 154: 151: 62: 59: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 7961: 7950: 7947: 7945: 7942: 7940: 7937: 7935: 7932: 7931: 7929: 7914: 7911: 7909: 7906: 7904: 7901: 7899: 7896: 7894: 7891: 7889: 7886: 7885: 7883: 7879: 7873: 7870: 7868: 7865: 7863: 7862:Crime mapping 7860: 7858: 7855: 7853: 7850: 7848: 7845: 7843: 7840: 7839: 7837: 7833: 7827: 7824: 7822: 7819: 7817: 7814: 7813: 7811: 7807: 7801: 7798: 7796: 7793: 7791: 7788: 7786: 7783: 7781: 7778: 7776: 7773: 7771: 7770:Climate model 7768: 7766: 7763: 7761: 7758: 7757: 7755: 7753:Environmental 7751: 7745: 7742: 7740: 7737: 7735: 7732: 7730: 7727: 7725: 7722: 7720: 7717: 7715: 7712: 7711: 7709: 7707: 7703: 7699: 7692: 7687: 7685: 7680: 7678: 7673: 7672: 7669: 7653: 7651: 7648: 7647: 7645: 7642: 7639: 7636: 7634: 7631: 7630: 7626: 7620: 7617: 7615: 7612: 7610: 7607: 7605: 7602: 7601: 7599: 7595: 7589: 7586: 7584: 7583: 7579: 7577: 7574: 7572: 7569: 7567: 7564: 7562: 7559: 7556: 7554: 7549: 7546: 7544: 7541: 7540: 7538: 7534: 7528: 7527:Drew Weissman 7525: 7523: 7520: 7518: 7515: 7513: 7512:H. Fred Clark 7510: 7508: 7505: 7503: 7500: 7498: 7495: 7493: 7490: 7488: 7485: 7483: 7482:Louis Pasteur 7480: 7478: 7477:Edward Jenner 7475: 7474: 7472: 7466: 7454: 7451: 7449: 7448:DTwP-HepB-Hib 7446: 7444: 7443:DTaP-IPV-HepB 7441: 7439: 7436: 7435: 7434:combination: 7433: 7431: 7428: 7426: 7423: 7421: 7418: 7416: 7413: 7409: 7406: 7402: 7399: 7397: 7394: 7393: 7392: 7389: 7387: 7384: 7382: 7379: 7377: 7374: 7373: 7372: 7369: 7367: 7364: 7363: 7361: 7357: 7349: 7346: 7344: 7341: 7340: 7338: 7337: 7335: 7333: 7332:Helminthiasis 7329: 7321: 7318: 7317: 7315: 7311: 7308: 7307: 7306: 7303: 7302: 7300: 7296: 7288: 7285: 7283: 7280: 7278: 7275: 7273: 7270: 7268: 7265: 7263: 7260: 7258: 7255: 7254: 7252: 7248: 7245: 7243: 7240: 7238: 7235: 7234: 7233:combination: 7232: 7230: 7227: 7223: 7220: 7218: 7215: 7214: 7212: 7210: 7207: 7205: 7202: 7200: 7197: 7193: 7190: 7188: 7185: 7183: 7180: 7178: 7175: 7173: 7170: 7168: 7165: 7163: 7160: 7158: 7155: 7153: 7150: 7148: 7145: 7143: 7140: 7138: 7135: 7133: 7130: 7128: 7125: 7123: 7120: 7119: 7118: 7115: 7113: 7110: 7108: 7105: 7103: 7100: 7096: 7093: 7091: 7088: 7087: 7086: 7083: 7081: 7078: 7076: 7073: 7071: 7068: 7066: 7063: 7059: 7056: 7054: 7051: 7050: 7049: 7046: 7044: 7041: 7039: 7036: 7034: 7031: 7029: 7026: 7022: 7019: 7017: 7014: 7011: 7007: 7004: 7003: 7002: 6999: 6995: 6992: 6991: 6990: 6987: 6985: 6982: 6980: 6977: 6976: 6974: 6970: 6962: 6959: 6957: 6954: 6952: 6949: 6948: 6946: 6942: 6939: 6937: 6936:DPT/DTwP/DTaP 6934: 6933: 6932:combination: 6931: 6929: 6926: 6922: 6919: 6917: 6914: 6913: 6912: 6909: 6905: 6902: 6901: 6900: 6897: 6895: 6892: 6890: 6887: 6883: 6880: 6878: 6875: 6874: 6873: 6870: 6868: 6865: 6863: 6860: 6856: 6853: 6851: 6848: 6847: 6846: 6845:Meningococcus 6843: 6841: 6838: 6836: 6835:Leptospirosis 6833: 6831: 6828: 6826: 6823: 6821: 6818: 6816: 6813: 6811: 6808: 6807: 6805: 6801: 6798: 6794: 6786: 6783: 6781: 6778: 6776: 6773: 6771: 6770:Vaccine court 6768: 6766: 6763: 6762: 6760: 6756: 6753: 6751: 6748: 6746: 6743: 6741: 6738: 6736: 6733: 6731: 6728: 6726: 6725:GAVI Alliance 6723: 6722: 6720: 6719: 6717: 6713: 6707: 6704: 6702: 6699: 6697: 6693: 6690: 6688: 6684: 6680: 6676: 6673: 6669: 6666: 6664: 6661: 6660: 6658: 6656: 6653: 6651: 6648: 6647: 6645: 6641: 6635: 6632: 6630: 6627: 6625: 6622: 6620: 6617: 6613: 6610: 6609: 6608: 6605: 6603: 6600: 6599: 6597: 6593: 6588: 6584: 6580: 6576: 6572: 6568: 6564: 6557: 6552: 6550: 6545: 6543: 6538: 6537: 6534: 6520: 6517: 6516: 6515: 6512: 6510: 6507: 6505: 6502: 6500: 6497: 6495: 6492: 6489: 6487: 6484: 6482: 6479: 6478: 6476: 6472: 6466: 6463: 6461: 6458: 6456: 6453: 6451: 6448: 6445: 6443: 6440: 6438: 6435: 6433: 6430: 6428: 6425: 6423: 6420: 6418: 6415: 6413: 6410: 6408: 6405: 6403: 6400: 6398: 6395: 6391: 6388: 6387: 6385: 6383: 6380: 6378: 6375: 6374: 6372: 6370: 6364: 6353: 6351: 6348: 6346: 6343: 6341: 6338: 6336: 6333: 6331: 6328: 6326: 6325:Sterilization 6323: 6321: 6318: 6316: 6313: 6311: 6308: 6306: 6303: 6299: 6296: 6294: 6293:Surgical mask 6291: 6289: 6286: 6285: 6284: 6281: 6279: 6276: 6274: 6271: 6267: 6264: 6262: 6259: 6256: 6253: 6252: 6251: 6250:Public health 6248: 6246: 6243: 6239: 6236: 6235: 6234: 6231: 6229: 6226: 6222: 6219: 6218: 6217: 6214: 6210: 6207: 6205: 6202: 6200: 6197: 6196: 6195: 6192: 6190: 6187: 6185: 6182: 6180: 6177: 6175: 6172: 6170: 6167: 6166: 6164: 6162: 6156: 6148: 6145: 6143: 6140: 6138: 6135: 6133: 6130: 6128: 6125: 6124: 6123: 6120: 6118: 6115: 6113: 6110: 6108: 6105: 6103: 6102:Phage therapy 6100: 6098: 6095: 6091: 6088: 6087: 6086: 6085:Immunotherapy 6083: 6081: 6078: 6076: 6073: 6071: 6068: 6066: 6063: 6061: 6058: 6056: 6053: 6049: 6046: 6045: 6044: 6043:Antimicrobial 6041: 6037: 6034: 6033: 6032: 6029: 6027: 6024: 6020: 6017: 6016: 6015: 6012: 6011: 6009: 6005: 6002: 6000: 5992: 5985: 5983: 5980: 5978: 5975: 5973: 5970: 5968: 5965: 5963: 5960: 5957: 5955: 5952: 5950: 5947: 5944: 5942: 5939: 5936: 5934:Genitourinary 5933: 5929: 5926: 5925: 5924: 5921: 5917: 5914: 5912: 5909: 5908: 5906: 5905: 5903: 5897: 5887: 5884: 5882: 5879: 5877: 5874: 5872: 5869: 5867: 5864: 5862: 5859: 5857: 5854: 5852: 5849: 5847: 5844: 5842: 5839: 5837: 5834: 5832: 5829: 5827: 5824: 5820: 5817: 5815: 5812: 5811: 5810: 5807: 5805: 5802: 5800: 5797: 5796: 5794: 5792:in population 5788: 5782: 5779: 5777: 5774: 5772: 5769: 5767: 5764: 5762: 5759: 5757: 5756:Herd immunity 5754: 5752: 5749: 5747: 5744: 5742: 5739: 5737: 5734: 5732: 5729: 5727: 5724: 5722: 5719: 5718: 5716: 5714: 5710: 5692: 5689: 5688: 5686: 5682: 5675: 5674: 5672: 5668: 5661: 5660: 5658: 5654: 5648: 5645: 5644: 5642: 5640:Genitourinary 5638: 5632: 5628: 5626: 5623: 5621: 5618: 5616: 5613: 5612: 5610: 5606: 5600: 5597: 5595: 5592: 5590: 5587: 5583: 5582:Contamination 5580: 5579: 5578: 5575: 5574: 5572: 5568: 5560: 5557: 5555: 5552: 5551: 5550:Vector-borne 5549: 5545: 5542: 5540: 5537: 5536: 5534: 5530: 5527: 5524: 5522: 5519: 5517: 5514: 5513: 5511: 5509: 5506: 5505: 5503: 5497: 5491: 5488: 5486: 5483: 5479: 5476: 5475: 5474: 5471: 5469: 5466: 5465: 5463: 5459: 5456: 5452: 5446: 5443: 5442: 5440: 5434: 5428: 5425: 5421: 5418: 5414: 5411: 5408: 5405: 5404: 5403: 5400: 5399: 5397: 5393: 5390: 5388: 5385: 5384: 5382: 5380: 5377: 5376: 5374: 5370: 5366: 5360: 5357: 5355: 5352: 5350: 5347: 5345: 5342: 5341: 5339: 5337: 5336:Cross-species 5333: 5330: 5326: 5319: 5316: 5313: 5310: 5308: 5305: 5303: 5300: 5297: 5296: 5294: 5290: 5287: 5283: 5277: 5276:Window period 5274: 5272: 5269: 5267: 5264: 5262: 5259: 5257: 5254: 5252: 5249: 5247: 5244: 5242: 5241:Latent period 5239: 5237: 5234: 5232: 5229: 5227: 5224: 5222: 5219: 5217: 5214: 5212: 5209: 5207: 5204: 5203: 5201: 5195: 5192: 5190: 5186: 5176: 5173: 5171: 5168: 5166: 5163: 5161: 5158: 5156: 5153: 5151: 5148: 5144: 5141: 5140: 5138: 5136: 5133: 5131: 5128: 5126: 5123: 5121: 5120:Deforestation 5118: 5116: 5113: 5109: 5106: 5104: 5101: 5100: 5098: 5096: 5093: 5090: 5087: 5085: 5082: 5081: 5079: 5077: 5073: 5065:Stress levels 5064: 5061: 5057: 5054: 5053: 5051: 5048: 5045: 5042: 5039: 5036: 5035: 5034: 5031: 5029: 5026: 5024: 5021: 5019: 5016: 5012: 5009: 5007: 5004: 5003: 5002: 4999: 4997: 4994: 4992: 4989: 4987: 4984: 4982: 4979: 4978: 4976: 4974: 4970: 4964: 4961: 4957: 4954: 4952: 4949: 4947: 4944: 4943: 4942: 4939: 4935: 4932: 4930: 4927: 4925: 4922: 4920: 4917: 4916: 4915: 4912: 4910: 4907: 4903: 4900: 4899: 4898: 4897:Pathogenicity 4895: 4891: 4888: 4887: 4886: 4883: 4881: 4878: 4876: 4873: 4872: 4870: 4868: 4864: 4861: 4857: 4852: 4848: 4840: 4835: 4833: 4828: 4826: 4821: 4820: 4817: 4810: 4806: 4803: 4800: 4797: 4794: 4791: 4788: 4787:Model-Builder 4785: 4784: 4780: 4779: 4775: 4768: 4762: 4754: 4749: 4745: 4741: 4736: 4731: 4727: 4723: 4720:(4): 255–65. 4719: 4715: 4711: 4706: 4702: 4698: 4693: 4688: 4684: 4680: 4677:(6): 477–87. 4676: 4672: 4668: 4663: 4652: 4651: 4645: 4634: 4633: 4627: 4623: 4618: 4617: 4612: 4603: 4597: 4589: 4585: 4580: 4575: 4571: 4567: 4560: 4557: 4552: 4548: 4543: 4538: 4534: 4530: 4526: 4522: 4518: 4511: 4508: 4503: 4499: 4494: 4489: 4485: 4481: 4478:(2): 83–100. 4477: 4473: 4469: 4462: 4459: 4454: 4450: 4445: 4440: 4436: 4432: 4428: 4424: 4420: 4416: 4412: 4405: 4402: 4397: 4393: 4388: 4383: 4379: 4375: 4371: 4367: 4363: 4356: 4353: 4348: 4344: 4340: 4336: 4331: 4326: 4322: 4318: 4314: 4310: 4306: 4299: 4296: 4288:September 19, 4284: 4277: 4270: 4267: 4262: 4256: 4253: 4248: 4244: 4240: 4236: 4231: 4226: 4222: 4218: 4213: 4208: 4205:(4): 044313. 4204: 4200: 4196: 4189: 4186: 4181: 4177: 4172: 4167: 4163: 4159: 4154: 4149: 4145: 4141: 4137: 4130: 4127: 4122: 4118: 4113: 4108: 4104: 4100: 4096: 4092: 4088: 4084: 4079: 4078:q-bio/0610057 4074: 4070: 4066: 4062: 4055: 4052: 4047: 4046: 4039: 4036: 4031: 4027: 4022: 4017: 4013: 4009: 4005: 4001: 3997: 3993: 3989: 3982: 3979: 3974: 3970: 3966: 3962: 3958: 3954: 3950: 3943: 3940: 3935: 3931: 3926: 3921: 3917: 3913: 3909: 3905: 3901: 3897: 3894:(2): 191504. 3893: 3889: 3885: 3878: 3875: 3870: 3866: 3861: 3856: 3852: 3848: 3844: 3840: 3836: 3832: 3827: 3822: 3818: 3814: 3810: 3803: 3800: 3795: 3782: 3773: 3768: 3763: 3758: 3754: 3747: 3744: 3739: 3735: 3730: 3725: 3721: 3717: 3713: 3706: 3703: 3698: 3694: 3689: 3684: 3680: 3676: 3672: 3668: 3664: 3657: 3654: 3649: 3645: 3641: 3637: 3632: 3627: 3623: 3619: 3615: 3608: 3605: 3600: 3596: 3592: 3588: 3583: 3578: 3573: 3568: 3564: 3560: 3556: 3549: 3546: 3541: 3537: 3533: 3529: 3524: 3519: 3515: 3511: 3507: 3503: 3499: 3492: 3489: 3484: 3480: 3475: 3470: 3466: 3462: 3458: 3454: 3450: 3446: 3442: 3435: 3432: 3427: 3420: 3418: 3414: 3409: 3408: 3400: 3397: 3392: 3385: 3382: 3377: 3371: 3368: 3363: 3359: 3355: 3351: 3347: 3343: 3340:(5): 275–88. 3339: 3335: 3328: 3325: 3320: 3316: 3312: 3308: 3304: 3300: 3296: 3292: 3285: 3282: 3277: 3270: 3268: 3264: 3257: 3252: 3249: 3247: 3244: 3242: 3239: 3237: 3234: 3232: 3229: 3227: 3224: 3222: 3219: 3217: 3214: 3212: 3209: 3207: 3204: 3202: 3199: 3197: 3194: 3192: 3189: 3188: 3183: 3181: 3179: 3175: 3171: 3167: 3163: 3155: 3150: 3146: 3142: 3139: 3135: 3132: 3131: 3130: 3128: 3119: 3117: 3114: 3095: 3089: 3086: 3083: 3079: 3074: 3065: 3062: 3059: 3053: 3048: 3045: 3039: 3030: 3027: 3024: 3015: 3011: 3007: 3000: 2995: 2990: 2986: 2978: 2977: 2976: 2974: 2970: 2963: 2944: 2935: 2932: 2929: 2921: 2917: 2912: 2907: 2900: 2896: 2892: 2887: 2882: 2878: 2870: 2856: 2849: 2845: 2841: 2836: 2831: 2827: 2819: 2818: 2817: 2815: 2811: 2804: 2799: 2797: 2790: 2786: 2781: 2776: 2772: 2747: 2744: 2741: 2733: 2729: 2725: 2720: 2716: 2708: 2707: 2706: 2704: 2694: 2690: 2683: 2679: 2672: 2668: 2663: 2661: 2650: 2634: 2629: 2622: 2619: 2616: 2610: 2607: 2604: 2598: 2593: 2589: 2581: 2580: 2579: 2578:, we obtain: 2563: 2559: 2535: 2530: 2525: 2521: 2517: 2513: 2509: 2506: 2503: 2498: 2495: 2488: 2482: 2479: 2469: 2465: 2461: 2457: 2453: 2450: 2447: 2444: 2437: 2436: 2435: 2418: 2415: 2412: 2409: 2406: 2401: 2398: 2391: 2385: 2375: 2371: 2367: 2363: 2359: 2353: 2347: 2336: 2324: 2323: 2322: 2320: 2301: 2294: 2290: 2286: 2281: 2278: 2275: 2270: 2266: 2258: 2257: 2256: 2254: 2247: 2242: 2240: 2217: 2210: 2206: 2202: 2197: 2194: 2191: 2188: 2180: 2173: 2169: 2165: 2160: 2157: 2154: 2151: 2143: 2140: 2137: 2131: 2128: 2125: 2119: 2114: 2110: 2097: 2096: 2095: 2093: 2090: +  2089: 2085: 2081: 2077: 2069: 2051: 2046: 2042: 2039: 2033: 2028: 2025: 2020: 2017: 2014: 2003: 1999: 1992: 1977: 1973: 1966: 1951: 1950: 1949: 1932: 1918: 1914: 1910: 1905: 1901: 1888: 1875: 1871: 1864: 1855: 1841: 1837: 1833: 1828: 1824: 1811: 1805: 1802: 1792: 1788: 1781: 1775: 1772: 1766: 1761: 1758: 1753: 1748: 1744: 1736: 1735: 1734: 1717: 1714: 1711: 1708: 1703: 1699: 1691: 1690: 1689: 1687: 1682: 1680: 1676: 1671: 1670:herd immunity 1663: 1659: 1656: 1653: 1650: 1647: 1644: 1641: 1639: 1636: 1633: 1631: 1627: 1625: 1624:phylodynamics 1622: 1619: 1617: 1613: 1611: 1608: 1605: 1603:-epidemiology 1602: 1599: 1597: 1593: 1590: 1587: 1584: 1582: 1579: 1578: 1577: 1574: 1572: 1568: 1564: 1560: 1556: 1552: 1544: 1542: 1540: 1539:SEIS and SEIR 1531: 1510: 1504: 1497: 1479: 1473: 1466: 1448: 1442: 1435: 1434: 1433: 1416: 1410: 1387: 1381: 1358: 1352: 1340: 1324: 1321: 1318: 1298: 1295: 1292: 1272: 1269: 1266: 1246: 1243: 1237: 1231: 1228: 1225: 1222: 1216: 1210: 1207: 1204: 1201: 1195: 1189: 1180: 1162: 1159: 1156: 1136: 1133: 1130: 1110: 1107: 1101: 1095: 1092: 1089: 1086: 1080: 1074: 1071: 1068: 1065: 1059: 1053: 1044: 1038:The SIR model 1037: 1035: 1033: 1032:Markov chains 1027: 1019: 1017: 1015: 1011: 992: 987: 984: 979: 976: 973: 968: 964: 956: 955: 954: 952: 947: 942: 923: 918: 915: 910: 905: 901: 892: 889: 884: 877: 873: 869: 860: 859: 858: 856: 837: 830: 826: 822: 817: 814: 807: 806: 805: 803: 784: 779: 776: 771: 768: 761: 760: 759: 757: 753: 749: 744: 739: 735: 732: 728: 721: 717: 698: 695: 689: 684: 680: 669: 668: 667: 665: 661: 657: 653: 645: 643: 641: 634: 627: 620: 616: 609: 605: 599: 591: 589: 571: 564: 559: 551: 543: 534: 530: 501: 491: 488: 482: 477: 473: 449: 446: 423: 415: 411: 407: 403: 381: 377: 348: 335: 322: 319: 316: 307: 294: 290: 280: 275: 271: 262: 260: 256: 251: 246: 242: 234: 232: 230: 229:herd immunity 226: 221: 213: 211: 207: 201:Deterministic 200: 198: 192: 187: 181: 176: 173: 169: 165: 161: 160: 159: 152: 150: 148: 144: 140: 135: 133: 129: 125: 121: 116: 114: 110: 105: 103: 99: 95: 91: 87: 82: 80: 76: 72: 67: 60: 58: 56: 52: 48: 47:public health 44: 40: 36: 32: 19: 7934:Epidemiology 7604:Epidemiology 7580: 7552: 7438:DTaP-IPV/Hib 7229:Yellow fever 7142:EpiVacCorona 6899:Tuberculosis 6872:Pneumococcal 6840:Lyme disease 6668:Heterologous 6618: 6567:Immunization 6233:Notification 6204:Hand washing 6199:Food hygiene 6184:Disinfection 6080:Immunization 6031:Anthelmintic 6019:prophylactic 5907:Respiratory 5831:Hyperendemic 5781:WAIFW matrix 5436:Environment- 5189:Transmission 5165:Urbanization 4963:Host tropism 4859:Determinants 4845:Concepts in 4809:surveillance 4752: 4717: 4713: 4674: 4670: 4654:. Retrieved 4649: 4637:. Retrieved 4631: 4621: 4596:cite journal 4569: 4565: 4559: 4524: 4520: 4510: 4475: 4471: 4461: 4418: 4414: 4404: 4369: 4365: 4355: 4312: 4308: 4298: 4286:. Retrieved 4282: 4269: 4255: 4202: 4198: 4188: 4143: 4139: 4129: 4068: 4064: 4054: 4044: 4038: 3995: 3991: 3981: 3956: 3952: 3942: 3891: 3887: 3877: 3819:(1): 40885. 3816: 3812: 3802: 3781:cite journal 3772:10419/257469 3746: 3719: 3715: 3705: 3670: 3666: 3656: 3621: 3617: 3607: 3562: 3558: 3548: 3505: 3501: 3491: 3448: 3444: 3434: 3425: 3406: 3399: 3390: 3384: 3370: 3337: 3333: 3327: 3294: 3290: 3284: 3275: 3251:WAIFW matrix 3159: 3123: 3110: 2972: 2968: 2961: 2959: 2813: 2809: 2802: 2800: 2792: 2788: 2782: 2774: 2767: 2765: 2699: 2692: 2681: 2674: 2670: 2666: 2664: 2656: 2654: 2551:Solving for 2550: 2433: 2318: 2316: 2249: 2245: 2243: 2238: 2236: 2091: 2087: 2083: 2079: 2075: 2074: 1947: 1732: 1685: 1683: 1667: 1652:transmission 1575: 1548: 1535: 1374:; infected, 1344: 1029: 1013: 1009: 1007: 948: 940: 938: 852: 801: 799: 755: 751: 747: 745: 737: 734:steady state 726: 719: 713: 655: 649: 639: 632: 625: 618: 607: 606:(denoted by 603: 601: 336: 263: 238: 217: 208: 204: 196: 171: 167: 156: 136: 117: 111:applied the 106: 83: 78: 77:in his book 68: 64: 29: 7944:Vaccination 7640:from market 7536:Controversy 7470:researchers 7386:Hepatitis B 7272:Hepatitis C 7217:Chicken pox 7043:Hepatitis E 7038:Hepatitis B 7033:Hepatitis A 6984:Chikungunya 6961:Shigellosis 6815:Brucellosis 6701:Therapeutic 6655:Inactivated 6595:Development 6583:Inoculation 6575:Vaccination 6486:Eradication 6397:Biosecurity 6122:Vaccination 6097:Inoculation 6075:Drug safety 6070:Combination 5997:and Control 5945:Soft tissue 5899:Anatomical 5866:Seasonality 5846:Mesoendemic 5826:Holoendemic 5819:Farr's laws 5731:Attack rate 5529:Animal bite 5525:Insect bite 5461:Respiratory 5088:Air quality 5076:Environment 4986:Comorbidity 4902:Attack rate 4885:Infectivity 4751:Capasso V. 3751:Tembine H. 3582:10037/19057 3291:SIAM Review 3241:Risk factor 3156:Reliability 3140:Eradication 3133:Elimination 3127:eradication 2689:vaccination 153:Assumptions 128:susceptible 109:Ronald Ross 102:germ theory 75:John Graunt 55:vaccination 41:(including 7928:Categories 7706:Biological 7571:Thiomersal 7517:Paul Offit 7492:Jonas Salk 7468:Inventors/ 7339:research: 7316:research: 7253:research: 7182:Skycovione 7172:Sanofi–GSK 7117:SARS-CoV-2 7028:Hantavirus 6994:rVSV-ZEBOV 6979:Adenovirus 6947:research: 6825:Diphtheria 6663:Attenuated 6369:infections 6310:Sanitation 6278:Quarantine 6137:resistance 6055:Antiseptic 6036:Ascaricide 6026:Antifungal 6014:Antibiotic 5995:Prevention 5928:Intestinal 5861:Prevalence 5841:Inequality 5790:Occurrence 5589:Breastmilk 5473:Bioaerosol 5445:Sapronosis 5420:Horizontal 5292:Endogenous 5271:Viral load 5231:Index case 4656:2016-02-15 4639:2023-02-27 4212:2103.12634 3826:1606.07825 3258:References 3166:SARS-CoV-2 3149:rinderpest 3137:threshold. 2773:is simply 1679:poliovirus 1596:resistance 193:Stochastic 147:SARS-CoV-2 137:Recently, 51:parameters 7650:Phase III 7638:Withdrawn 7566:Pox party 7376:ALVAC-CEA 7298:Protozoan 7187:Sputnik V 7137:CoronaVac 7107:Rotavirus 7010:Pandemrix 6862:Pertussis 6803:Bacterial 6687:Synthetic 6650:Conjugate 6602:Adjuvants 6579:Infection 6481:Discovery 6407:Disease X 6367:Emerging 6315:Screening 6216:Isolation 6060:Antiviral 5886:Twindemic 5836:Incidence 5713:Modelling 5676:Perinatal 5608:Cutaneous 5499:Linked to 5409:Perinatal 5328:Exogenous 5320:formation 5062:Pregnancy 4919:Endotoxin 4914:Virulence 4761:cite book 4247:232320251 4153:1408.2701 4103:1539-3755 3916:2054-5703 3851:2045-2322 3648:216074714 3624:: m1567. 3599:216426533 3591:1460-7425 3565:(2): 10. 3540:214771531 3410:. Dutton. 3170:Swine flu 3087:− 3063:− 3028:− 2933:− 2745:− 2620:− 2611:⁡ 2605:− 2518:− 2510:− 2480:β 2475:∞ 2466:∫ 2462:− 2454:− 2413:− 2386:λ 2381:∞ 2372:∫ 2368:− 2343:∞ 2340:→ 2282:− 2248:(denoted 2198:− 2155:− 2129:− 2120:⋅ 2082:), since 2040:β 2029:μ 2026:λ 1993:⁡ 1967:⁡ 1889:⁡ 1865:⁡ 1812:⁡ 1803:μ 1782:⁡ 1773:μ 1733:In turn, 1709:⋅ 1658:virulence 1614:pathogen 1592:evolution 1319:β 1293:β 1267:γ 1157:γ 1131:β 898:⇒ 575:⟩ 569:⟨ 555:⟩ 549:⟨ 544:− 540:⟩ 527:⟨ 505:⟩ 499:⟨ 492:γ 489:β 450:γ 424:β 387:⟩ 374:⟨ 352:⟩ 346:⟨ 317:− 311:⟩ 305:⟨ 300:⟩ 287:⟨ 43:in plants 7408:Prostvac 7401:Gardasil 7396:Cervarix 7343:Hookworm 7222:Shingles 7204:Smallpox 7122:Corbevax 7058:Gardasil 7053:Cervarix 6796:Vaccines 6750:Schedule 6721:Global: 6629:Timeline 6571:Vaccines 6390:EARS-Net 6305:Safe sex 6257:services 6228:Lockdown 5999:measures 5901:location 5881:Syndemic 5876:Sporadic 5856:Pandemic 5851:Outbreak 5809:Epidemic 5662:Prenatal 5554:Mosquito 5438:to-human 5413:Neonatal 5406:Prenatal 5354:Zoonosis 5199:concepts 5130:Humidity 5115:Commerce 4991:Diabetes 4924:Exotoxin 4807:package 4781:Software 4701:18533288 4588:33378907 4551:33381848 4502:33353987 4453:32576668 4396:29928732 4239:35590624 4180:14306926 4121:17930312 4030:32269067 3934:32257317 3869:28106086 3738:24266045 3697:32820573 3640:32317328 3532:32242115 3483:18784795 3354:15334536 3319:10836889 3236:Pandemic 3184:See also 3145:smallpox 1610:Pandemic 1588:networks 1559:pathogen 664:epidemic 640:endemic: 250:dynamics 241:networks 94:smallpox 39:epidemic 7597:Related 7543:General 7305:Malaria 7192:Valneva 7157:Novavax 7152:Moderna 7147:Janssen 7132:CanSino 7112:Rubella 7070:Measles 6941:Td/Tdap 6911:Typhoid 6894:Tetanus 6889:Q fever 6820:Cholera 6810:Anthrax 6679:Peptide 6643:Classes 6624:Storage 6194:Hygiene 6132:booster 6065:Asepsis 5804:Endemic 5799:Cluster 5383:Source 5318:Biofilm 5155:Poverty 5125:Ecology 5103:El Niño 5056:Smoking 4934:factors 4875:Biofilm 4851:Outline 4744:9336095 4735:6990198 4692:7097581 4542:7773487 4493:7754704 4444:7331793 4423:Bibcode 4415:Science 4387:6001967 4347:2059741 4317:Bibcode 4217:Bibcode 4158:Bibcode 4112:2215389 4083:Bibcode 4021:7164388 4000:Bibcode 3992:Science 3973:2982521 3925:7062106 3896:Bibcode 3860:5247741 3831:Bibcode 3688:7461315 3510:Bibcode 3474:2326892 3453:Bibcode 3362:8169180 3299:Bibcode 2669:(where 2434:Hence, 2239:exceeds 1527:others. 731:endemic 656:exactly 652:endemic 518:since 412:with a 61:History 7835:Social 7633:WHO-EM 7553:Lancet 7430:TA-NIC 7415:NicVAX 7262:Dengue 7102:Rabies 6928:Typhus 6867:Plague 6745:Policy 6706:Toxoid 6634:Trials 6402:CRISPR 6354:Zoning 6209:Gloves 5620:Fomite 5454:Routes 5349:Vector 5216:Fomite 5197:Basic 5160:Travel 5040:Gender 4742:  4732:  4699:  4689:  4586:  4549:  4539:  4500:  4490:  4451:  4441:  4394:  4384:  4345:  4337:  4245:  4237:  4178:  4119:  4109:  4101:  4028:  4018:  3971:  3932:  3922:  3914:  3867:  3857:  3849:  3736:  3695:  3685:  3646:  3638:  3597:  3589:  3538:  3530:  3502:Nature 3481:  3471:  3360:  3352:  3317:  2705:where 1601:immuno 1571:plants 693:  677:  402:moment 337:where 132:immune 7561:NCVIA 7425:TA-CD 7359:Other 7310:RTS,S 7090:Sabin 7085:Polio 7080:Mumps 6989:Ebola 6972:Viral 6921:ViCPS 6916:Ty21a 6850:MeNZB 6780:VAERS 6730:NITAG 6659:Live 6474:Other 5982:Fetus 5977:Mouth 5972:Tooth 5967:Blood 5954:Joint 5814:Curve 5684:Other 5631:wound 5629:Open 5599:Feces 5594:Water 5285:Modes 5143:Flood 4867:Agent 4339:94815 4335:JSTOR 4279:(PDF) 4243:S2CID 4207:arXiv 4176:S2CID 4148:arXiv 4073:arXiv 3969:JSTOR 3821:arXiv 3644:S2CID 3595:S2CID 3536:S2CID 3358:S2CID 3315:S2CID 3178:Ebola 2673:< 245:graph 7287:Zika 7247:MMRV 7095:Salk 7075:Mpox 7021:LAIV 7016:H5N1 7006:H1N1 6882:PPSV 6765:ACIP 6761:US: 6735:SAGE 6696:mRNA 6612:list 6238:list 6159:Non- 5949:Bone 5941:Skin 5625:Soil 5615:Burn 5577:Food 5559:Tick 5221:Host 4981:Burn 4973:Host 4799:STEM 4767:link 4740:PMID 4697:PMID 4602:link 4584:PMID 4547:PMID 4498:PMID 4449:PMID 4392:PMID 4343:PMID 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Index

Epidemiological model
Mathematical models
infectious diseases
epidemic
in plants
public health
parameters
vaccination
causes of death
John Graunt
mathematical modelling
Daniel Bernoulli
smallpox
life expectancy
germ theory
Ronald Ross
law of mass action
Kermack–McKendrick epidemic model
Reed–Frost epidemic model
susceptible
immune
agent-based models
compartmental models
SARS-CoV-2
age distribution
social structure
tag
grows exponentially
herd immunity
networks

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