Knowledge (XXG)

ResFinder

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356: 157:
reads from other sequencing platforms. Additionally, users can set their own threshold for detection. By default it is at 100% ID. ResFinder pulls from other database such as the Marilyn Roberts database, the Lahey database (now defunct) and
416: 397: 421: 194:
Zankari, E.; Hasman, H.; Cosentino, S.; Vestergaard, M.; Rasmussen, S.; Lund, O.; Aarestrup, F. M.; Larsen, M. V. (2012-11-01).
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van Hoek, Angela H. A. M.; Mevius, Dik; Guerra, Beatriz; Mullany, Peter; Roberts, Adam Paul; Aarts, Henk J. M. (2011).
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RATHER, P (1998). "Origins of the aminoglycoside modifying enzymes".
355: 162:. Other sources include published literature including reviews. 159: 196:"Identification of acquired antimicrobial resistance genes" 371: 296:"Acquired Antibiotic Resistance Genes: An Overview" 106: 101: 83: 78: 64: 59: 47: 37: 29: 24: 391: 8: 19: 33:Database of Antimicrobial Resistance genes. 398: 384: 18: 329: 311: 227: 183: 417:Antimicrobial resistance organizations 200:Journal of Antimicrobial Chemotherapy 7: 352: 350: 189: 187: 370:. You can help Knowledge (XXG) by 172:Antimicrobial Resistance databases 14: 141:in order to accomplish this. The 354: 1: 265:10.1016/s1368-7646(98)80044-7 438: 349: 422:Biological database stubs 300:Frontiers in Microbiology 313:10.3389/fmicb.2011.00203 127:antimicrobial resistance 43:Antimicrobial Resistance 253:Drug Resistance Updates 366:-related article is a 145:allows inputs of full 91:.genomicepidemiology 364:Biological database 21: 16:Biological database 212:10.1093/jac/dks261 379: 378: 206:(11): 2640–2644. 116: 115: 429: 400: 393: 386: 358: 351: 344: 343: 333: 315: 291: 285: 284: 248: 242: 241: 231: 191: 97: 94: 92: 90: 65:Primary citation 22: 437: 436: 432: 431: 430: 428: 427: 426: 407: 406: 405: 404: 348: 347: 293: 292: 288: 250: 249: 245: 193: 192: 185: 180: 168: 133:data sets. The 108: 87: 39: 17: 12: 11: 5: 435: 433: 425: 424: 419: 409: 408: 403: 402: 395: 388: 380: 377: 376: 359: 346: 345: 286: 259:(5): 285–291. 243: 182: 181: 179: 176: 175: 174: 167: 164: 125:that captures 114: 113: 110: 104: 103: 99: 98: 85: 81: 80: 76: 75: 66: 62: 61: 57: 56: 51: 45: 44: 41: 35: 34: 31: 27: 26: 15: 13: 10: 9: 6: 4: 3: 2: 434: 423: 420: 418: 415: 414: 412: 401: 396: 394: 389: 387: 382: 381: 375: 373: 369: 365: 360: 357: 353: 341: 337: 332: 327: 323: 319: 314: 309: 305: 301: 297: 290: 287: 282: 278: 274: 270: 266: 262: 258: 254: 247: 244: 239: 235: 230: 225: 221: 217: 213: 209: 205: 201: 197: 190: 188: 184: 177: 173: 170: 169: 165: 163: 161: 156: 152: 148: 144: 140: 136: 132: 128: 124: 120: 111: 105: 102:Miscellaneous 100: 96: 86: 82: 77: 74: 70: 67: 63: 58: 55: 52: 50: 46: 42: 36: 32: 28: 23: 372:expanding it 361: 303: 299: 289: 256: 252: 246: 203: 199: 131:whole-genome 118: 117: 107:Bookmarkable 153:, or short 129:genes from 30:Description 411:Categories 178:References 149:, partial 38:Data types 322:1664-302X 273:1368-7646 220:0305-7453 151:sequences 147:sequences 119:ResFinder 49:Organisms 20:ResFinder 340:22046172 281:17092809 238:22782487 166:See also 155:sequence 143:database 135:database 123:database 109:entities 73:22782487 54:Bacteria 40:captured 331:3202223 306:: 203. 229:3468078 84:Website 60:Contact 25:Content 338:  328:  320:  279:  271:  236:  226:  218:  79:Access 71:  362:This 139:BLAST 137:uses 121:is a 368:stub 336:PMID 318:ISSN 277:PMID 269:ISSN 234:PMID 216:ISSN 160:ARDB 93:.org 69:PMID 326:PMC 308:doi 261:doi 224:PMC 208:doi 112:yes 89:www 413:: 334:. 324:. 316:. 302:. 298:. 275:. 267:. 255:. 232:. 222:. 214:. 204:67 202:. 198:. 186:^ 399:e 392:t 385:v 374:. 342:. 310:: 304:2 283:. 263:: 257:1 240:. 210:: 95:.

Index

Organisms
Bacteria
PMID
22782487
www.genomicepidemiology.org.
database
antimicrobial resistance
whole-genome
database
BLAST
database
sequences
sequences
sequence
ARDB
Antimicrobial Resistance databases


"Identification of acquired antimicrobial resistance genes"
doi
10.1093/jac/dks261
ISSN
0305-7453
PMC
3468078
PMID
22782487
doi
10.1016/s1368-7646(98)80044-7
ISSN

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